Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0092 ATGATGGGCGGTGTGCCGCAGCCACTCAGGGCCTTGGGTGCTGCAACTGCTATCATATCCGGCGGAATGTTAGCTCTCTCTCTCGCTTCCTCTCTCACCATGCGAACGCTTCGAGCAGCTGCCGACGCTAAACGCAAAAAGGTTGCATTGCCTTGTGGAGTTTGTAGAGGAAAAGGCTATTACATATGCAAGCTATGCAAGGGAAACTCCACAATCGAATGGTCTCCTCTGTATGACCCTGTTGTTATAAACCCTTGTGTTTGCCCTACTTGTGATGGAAACAGGGTACAAAAATGTCTCAACTGTTTGGGAAAGGGCTATAATTGA 327 0.4862 MMGGVPQPLRALGAATAIISGGMLALSLASSLTMRTLRAAADAKRKKVALPCGVCRGKGYYICKLCKGNSTIEWSPLYDPVVINPCVCPTCDGNRVQKCLNCLGKGYN* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0092 108 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 40 107 - -
Vvi4g0092 108 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 47 107 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0092 Vvi-Chr4 890887 891504 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0092 - - vvi:100261115 204.527