Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0091 ATGGAAGAAAAAAGCAACACAAGAAGCAAATTCAAGAGGGTTTGTGTGTTCTGTGGGAGCAACTCTGGTAATAGGAAAGTTTTCAGTGATGCTGCTCTGGAATTGGGAAATGAACTGGTAAAGAGAAAGATAAACTTAGTCTATGGAGGGGGAAGTGTTGGATTAATGGGTTTGATTTCCCAGACGGTGTATGATGGAGATTGCCATGTTCTTGGTGTCATTCCAAGAGCCCTCATGCCTCTTGAGATATCTGGCCAAACTGTTGGAGAAGTAAGAATTGTGTCGGACATGCATGAGCGGAAAGCTGAAATGGCTCAAGAAGCTGATGCTTTTATTGCTCTTCCTGGAGGATATGGAACCATGGAAGAGCTGCTGGAGATGATTACATGGTCGCAACTGGGAATTCATAAAAAACCAGTTGGTCTGCTAAATGTTGATGGGTACTACAACTTTTTGCTTGCATTATTTGACAACGGTGTCAAAGAAGGCTTCATCAAGCCAGGTGCTCGGCATATAGTTGTCTCTGCTCCAACAGCCAAAGAACTTCTAGTAAAGATGGAGCAATACACTCCGGCCCATGAGCATGTTGCTTCTCATGAAAGCTGGCAGATGGAGCAACAGGGCGAGTATCCAAAGTCGCAAAATCCACAGTGA 654 0.4419 MEEKSNTRSKFKRVCVFCGSNSGNRKVFSDAALELGNELVKRKINLVYGGGSVGLMGLISQTVYDGDCHVLGVIPRALMPLEISGQTVGEVRIVSDMHERKAEMAQEADAFIALPGGYGTMEELLEMITWSQLGIHKKPVGLLNVDGYYNFLLALFDNGVKEGFIKPGARHIVVSAPTAKELLVKMEQYTPAHEHVASHESWQMEQQGEYPKSQNPQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0091 217 Gene3D - 10 205 - -
Vvi4g0091 217 MobiDBLite consensus disorder prediction 195 217 - -
Vvi4g0091 217 SUPERFAMILY MCP/YpsA-like 10 189 - -
Vvi4g0091 217 NCBIfam Rossman fold protein, TIGR00730 family 12 189 IPR005269 GO:0009691|GO:0016787
Vvi4g0091 217 PANTHER LOG FAMILY PROTEIN YJL055W 3 211 - -
Vvi4g0091 217 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 11 205 - -
Vvi4g0091 217 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Vvi4g0091 217 MobiDBLite consensus disorder prediction 201 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0091 Vvi-Chr4 880759 883598 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0091 K22522 - vvi:100266322 439.884