Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0076 ATGGACCCCCACCATCACCATGGCCTCACAGAAGAAGAATTCAGAGCCCTTGAGCCCATCATCCAAAACTACCACACCTTTGAGCCATCTCCAAACACCTGCACTTCTCTCATAACACAGAAGATTGATGCCCCAGCCCAAGTGGTCTGGCCCTTTGTGAGAAGCTTTGAGAACCCCCAGAAGTACAAGCACTTCATCAAGGATTGCACCATGAGGGGTGATGGTGGGGTTGGGAGTATAAGAGAAGTCACTGTGGTTTCTGGGCTTCCAGCCTCCACCAGCACAGAGAGGCTTGAGATTCTGGATGATGAGAAGCATATCCTAAGCTTCAGAGTTGTTGGAGGGGAGCACAGACTGAATAATTATCGATCAGTGACTTCAGTAAACGATTTTTCCAAAGAAGGGAAGGATTACACCATCGTTTTGGAGTCTTATATTGTGGACATACCAGAAGGGAACACAGGAGAAGACACCAAGATGTTTGTGGACACTGTCGTGAAGCTCAATCTTCAGAAGCTTGCAGTTGTGGCCATCACTTCTCTGCATGAAAATGAGTGA 558 0.4749 MDPHHHHGLTEEEFRALEPIIQNYHTFEPSPNTCTSLITQKIDAPAQVVWPFVRSFENPQKYKHFIKDCTMRGDGGVGSIREVTVVSGLPASTSTERLEILDDEKHILSFRVVGGEHRLNNYRSVTSVNDFSKEGKDYTIVLESYIVDIPEGNTGEDTKMFVDTVVKLNLQKLAVVAITSLHENE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0076 185 CDD PYR_PYL_RCAR_like 34 174 - -
Vvi4g0076 185 SUPERFAMILY Bet v1-like 34 174 - -
Vvi4g0076 185 Gene3D - 2 185 IPR023393 -
Vvi4g0076 185 PANTHER - 33 175 - -
Vvi4g0076 185 FunFam Abscisic acid receptor PYR1 1 185 - -
Vvi4g0076 185 Pfam Polyketide cyclase / dehydrase and lipid transport 39 174 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0076 Vvi-Chr4 763542 764099 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0076 K14496 - vvi:104878981 378.637