Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0074 ATGGCTGTGGTGGTGGTTTTTGATTTTGACAAGACCATTATAGACTGTGATAGTGATAATTGGGTTGTGGATGAGTTGGGTCTCACCCCTTTGTTCACTCAGCTCCTCCCCACCATGCCTTGGAACTCTCTCATGGATAGGATGTTTATGGAACTTCACTCACAAGGGAAAACTATGGAGGAAATTGCAGAATGTCTAAAAAGGGCTCCATTGCATCCCAGGATTATCTCTGCTATTAAATCAGCTCATGCTTCTGGGTGTGATTTGAGGATAGTCAGTGATGCAAATGCTTTCTTCATTGAGACAGTCCTGAAACATCATGGGTTGATGGACTGTTTCTCTGAAATCAAAACAAACCCTAGCTTTGTGGATGGAGAAGGAAGGCTCAGAATCTTACCATACCATGATCTCAAGTCATCCTCCCATGGCTGCAACTTCTGCCCTCCCAACATGTGCAAGGGTCTGGTCATGGAAAGGGTAAGGACCTCTGTGTCTGCAGAGGGGAAGAAGAGGTTTATCTATCTAGGGGATGGAAGTGCTGATTTTTGCTCAGGTTTGAAGCTTGGAGAAGGGGACTACCTGATGCCCAGAAAGAATTACCCCATTTGGGAGATTATTTGCAGTAACCCAAAGCTGATCAAGTCCAAGATTAATGAATGGAGTAATGGAGAGGAACTGGAGAAGATCCTCCTCCATTTGATCACTACAATCAGCATTGAGGAGAAGTGTAATATGAGGTCTGATAAGTGTCAGGCCAGTTCCATGGATTCCCATAAAACATTCCAAAGTGTTCTCCCAGTTCCTCATTAG 810 0.4432 MAVVVVFDFDKTIIDCDSDNWVVDELGLTPLFTQLLPTMPWNSLMDRMFMELHSQGKTMEEIAECLKRAPLHPRIISAIKSAHASGCDLRIVSDANAFFIETVLKHHGLMDCFSEIKTNPSFVDGEGRLRILPYHDLKSSSHGCNFCPPNMCKGLVMERVRTSVSAEGKKRFIYLGDGSADFCSGLKLGEGDYLMPRKNYPIWEIICSNPKLIKSKINEWSNGEELEKILLHLITTISIEEKCNMRSDKCQASSMDSHKTFQSVLPVPH* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0074 269 Gene3D - 1 191 IPR023214 -
Vvi4g0074 269 PANTHER PHOSPHATASE, ORPHAN 1, 2 2 242 IPR016965 GO:0016791
Vvi4g0074 269 NCBIfam MtnX-like HAD-IB family phosphatase 3 198 IPR006384 GO:0016791
Vvi4g0074 269 NCBIfam HAD-IB family phosphatase 4 183 - -
Vvi4g0074 269 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vvi4g0074 269 SUPERFAMILY HAD-like 4 189 IPR036412 -
Vvi4g0074 269 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0074 Vvi-Chr4 743815 745054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0074 K13248 - vvi:100247400 558.525