Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0073 ATGGCGGATTCAAGCGATTCGGTTTCCATTGATATGGAGACGATATCCCTGGGAGGAAAGGAGCACCTCGTGAAAACTAGCAAGGGTTCAGTCTCTGTTTCTGTGTTTGGAGACCCGGACAAGCCAGCTCTTGTTACTTATCCTGATTTAGCTCTAAATCATTTGTCCTGTTTTCAAGGCTTATTCTTCTGTCCAGAAGCATTTTCTTTGCTGCTCCACAACTTTTGCATTTATCATATAAGTCCTCCTGGGCATGAGTTGGGAGCCGATGCAGTTAGCCTTGATGAACCTGCACTTTCTGCTGATGACTTGGCAGATCAGATTGCTGAGGTTCTCAACTTTTTTGGACTTGGTGCAGTGATGTGCATGGGGGTTACAGCTGGAGCTTACATTCTTACCCTATTTGCTATAAAATATAGGCATCATGTTGTTGGTTTGATACTTATTTCTCCTCTATGCAAAGCACCATCTTGGACAGAATGGTTGTATAACAAGGTGATGTTGAATGTACTCTACTACTATGGCATGTGTGGTGTGGTGAAGGAGTTATTGCTTAAGAGGTACTTCAGCAAGGAAGTCCGTGGTAGTGCTCAGGTACCAGAATCAGATATAGTTCAGGCATGCAGAAGATTGCTGGATGAGAGGCAGAGTTCAAATGTTTTGAAGTTTCTTGAAGCGATTAATGGGAGACCAGACATTACGGAAGGATTGAGGAAACTACAATGTCGGTCACTATTATTTGTTGGGGATAACTCTCCTTTCCACTCTGAGGCCCTCCACATGACCTCAAAACTAGATAGAAGATATAGTGCCTTAGTGGAGGTTCAATCATGTGGGTCGATGGTGACCGAGGAGCAGCCTCATGCCATGTTGATTCCCATGGAGTACTTTCTCATGGGATATGGGTTGTACAGGCCATCGACGGTCAGTCTGAGTCCAAGAAGCCCCTTGAGTCCGTCTTGCATCGCTCCAGAGCTTCTCTCACCAGAAAGCATGGGCTTGAAGTTAAAACCGATAAAAACACGAATCTCATAA 1035 0.4464 MADSSDSVSIDMETISLGGKEHLVKTSKGSVSVSVFGDPDKPALVTYPDLALNHLSCFQGLFFCPEAFSLLLHNFCIYHISPPGHELGADAVSLDEPALSADDLADQIAEVLNFFGLGAVMCMGVTAGAYILTLFAIKYRHHVVGLILISPLCKAPSWTEWLYNKVMLNVLYYYGMCGVVKELLLKRYFSKEVRGSAQVPESDIVQACRRLLDERQSSNVLKFLEAINGRPDITEGLRKLQCRSLLFVGDNSPFHSEALHMTSKLDRRYSALVEVQSCGSMVTEEQPHAMLIPMEYFLMGYGLYRPSTVSLSPRSPLSPSCIAPELLSPESMGLKLKPIKTRIS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0073 344 Pfam Ndr family 21 305 IPR004142 -
Vvi4g0073 344 Gene3D alpha/beta hydrolase 14 300 IPR029058 -
Vvi4g0073 344 PANTHER N-MYC DOWNSTREAM REGULATED 11 341 IPR004142 -
Vvi4g0073 344 SUPERFAMILY alpha/beta-Hydrolases 24 298 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0073 Vvi-Chr4 736575 740885 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0073 - - vvi:100252510 674.855