Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0070 ATGGCGCTTCTGACGAGGACCTCACGCCTGGCCTTGACCGCGCCGCAGAGAATCGCTGCGCTGCACACGACGCTTCCATCCTTATCGTCGGAGTCGGCGGCGCCGGCGCCGTATTCTCGCGCTCCACCGCCATCGTCGACCTCTCCTGCCGGCCTCTCCAAGGCTGCGGAGTTCGTGATCTCCAAGGTCGACGATCTGTTGAACTGGGCTCGTCGCGGATCCATCTGGCCCATGACCTTCGGCCTCGCCTGCTGCGCTGTGGAGATGATGCACACCGGCGCTGCTCGCTACGATCTCGACCGATTCGGTATCATTTTCAGGCCCAGCCCTAGGCAGTCCGATTGTATGATCGTGGCCGGTACTCTCACCAACAAGATGGCTCCAGCGCTTCGCAAGGTGTATGACCAAATGCCTGAGCCTAGGTGGGTCGTCTCCATGGGAAGCTGTGCAAATGGGGGTGGATACTACCACTACTCCTACTCTGTTGTTCGGGGTTGTGACAGGATTGTCCCCGTTGACATCTATGTTCCAGGTTGCCCTCCAACTGCCGAAGCCCTACTCTATGGACTTCTTCAGCTGCAGAAGAAGATCAACAGGCGCAAAGATTTCCTCCACTGGTGGACCCAATGA 630 0.5873 MALLTRTSRLALTAPQRIAALHTTLPSLSSESAAPAPYSRAPPPSSTSPAGLSKAAEFVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTQ* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0070 209 MobiDBLite consensus disorder prediction 29 50 - -
Vvi4g0070 209 NCBIfam NADH-quinone oxidoreductase subunit B 58 199 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vvi4g0070 209 SUPERFAMILY HydA/Nqo6-like 57 201 - -
Vvi4g0070 209 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 165 181 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vvi4g0070 209 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 84 193 IPR006137 GO:0051536
Vvi4g0070 209 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 50 198 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vvi4g0070 209 PANTHER NADH DEHYDROGENASE 52 208 - -
Vvi4g0070 209 Gene3D - 55 209 - -
Vvi4g0070 209 FunFam NADH-quinone oxidoreductase subunit B 2 50 209 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0070 K03940 - vvi:100262767 384.415