Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0067 ATGGAGGCAGTTTCAACCTCCAGTATTCTCCCCCATGGGAAAGTCTCCGGTTTGAATCATCGGAGCTTTAATCAGAAATCGTCTATGTCATGCCCTCAGACCAGATCGTTTAAGTCTGCACACTGTTATTCATCTGAGGGTCTCAAGGGATCACAGCTTTTGAACTCCATTGAGAAGAGAAATCCAGTTGGGCAAACATTTTCATCTGCAGGAGCATACACTTATGTTGGAAGTGCTGTGGAATCCCCTACACATGCTGTGGAAGAAAAGGTTGGAGTGCTGCTTTTGAATCTTGGAGGACCAGAGACACTTCATGATGTTCAACCATTTTTGTTCAATTTATTTGCTGATCCAGATATTATTCGACTTCCAAGGCTGTTCCAGTTTCTCCAGCGACCATTGGCTCAACTAATTTCTGTGATCCGTGCTCCCAAGAGTAAAGAAGGGTATGCTGCAATAGGAGGCGGTTCACCTTTGCGAAAAATCACCGATGAGCAGGCACATGCAATTAAAGCGGCTTTGGAAGCAAAGAACATGCATGTAAATGTTTATGTTGGCATGCGTTACTGGTACCCATTCACTGAGGAAGCAATTGAGCAAATTAAGAAAGACAAGATTACAAGGCTTGTTGTGCTGCCACTTTATCCTCAATTCTCTATTTCTACAACTGGGTCAAGCATCCGTGTTCTTGAAAGTATCTTCAGGGAAGATGCATATCTGTCAAGGCTTCCTGTTTCTATTATACAATGCTGGTATCAACGACAAGGTTATATCAACTCTATGGCTGACTTGATTGAGGAAGAGCTGCAGATTTTCTCTAAGCCCAAGGAGGTGATGATATTCTTCAGTGCCCATGGAGTACCCGTTAGTTATGTTGAGGATGCTGGAGATCCATACAGAGATCAGATGGAGGAGTGCATCTACTTAATCATGCAAGAGTTGAAAGCTAGAGGAATCAGCAATAAGCATACTCTCGCTTACCAGAGTCGAGTTGGTCCTGTACAATGGCTGAAACCATACACTGATGAAGTTCTTGTTGAGCTTGGCCAAAAGGGTGTAAAAAGTCTCCTTGCTGTTCCAGTAAGCTTTGTAAGCGAACACATAGAAACACTTGAAGAGATTGACATGGAGTATAAGCACCTGGCTCTTGAATCTGGAATCGAGAACTGGGGCCGAGTCCCTGCTCTGGGTTGCACCTCTTCTTTCATCACAGATCTGGCAGATGCTGTGATAGAAGCTCTACCTGCGGCAAAGGCCATGACAACACAGAGCACCTCTAAGGAATTCAACATGGATCCTGTGAACTATGCTATAAAAATGTTCTTCGGATCAATCTTAGCATTTGTTTTGCTCTTGTCACCGAAAATGATATCAAAGTTCAAAAACCAGCTCTTTTGA 1398 0.4342 MEAVSTSSILPHGKVSGLNHRSFNQKSSMSCPQTRSFKSAHCYSSEGLKGSQLLNSIEKRNPVGQTFSSAGAYTYVGSAVESPTHAVEEKVGVLLLNLGGPETLHDVQPFLFNLFADPDIIRLPRLFQFLQRPLAQLISVIRAPKSKEGYAAIGGGSPLRKITDEQAHAIKAALEAKNMHVNVYVGMRYWYPFTEEAIEQIKKDKITRLVVLPLYPQFSISTTGSSIRVLESIFREDAYLSRLPVSIIQCWYQRQGYINSMADLIEEELQIFSKPKEVMIFFSAHGVPVSYVEDAGDPYRDQMEECIYLIMQELKARGISNKHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYKHLALESGIENWGRVPALGCTSSFITDLADAVIEALPAAKAMTTQSTSKEFNMDPVNYAIKMFFGSILAFVLLLSPKMISKFKNQLF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0067 465 Pfam Ferrochelatase 90 413 IPR001015 GO:0004325|GO:0006783
Vvi4g0067 465 CDD Ferrochelatase_C 261 397 IPR033644 -
Vvi4g0067 465 PANTHER FERROCHELATASE 87 430 IPR001015 GO:0004325|GO:0006783
Vvi4g0067 465 Gene3D - 252 395 - -
Vvi4g0067 465 CDD Ferrochelatase_N 91 253 IPR033659 -
Vvi4g0067 465 Gene3D - 90 414 - -
Vvi4g0067 465 FunFam Ferrochelatase 90 268 - -
Vvi4g0067 465 Hamap Coproporphyrin III ferrochelatase [cpfC]. 89 414 IPR001015 GO:0004325|GO:0006783
Vvi4g0067 465 NCBIfam ferrochelatase 89 413 IPR001015 GO:0004325|GO:0006783
Vvi4g0067 465 ProSitePatterns Ferrochelatase signature. 280 299 IPR019772 GO:0004325|GO:0006783
Vvi4g0067 465 SUPERFAMILY Chelatase 89 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0067 Vvi-Chr4 690671 694559 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0067 K01772 - vvi:100264627 919.842