Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0063 ATGGCTTGCTTACACGACCACAGCTGTGAAGATCACGATTGTGCCGCTGATTGGTCTCTCTACAAACATATAGACCTCTCTAAGGTATCTGCTTTAAATGAGGCTGTGCCAGGAAGTGTTAAGTCAGTTTTTAAAGCTTGGGAGCAGCGTTTGAATTCTTCAGAGGGACATTTAGAAAGCAATGATGGCGACCCTGAATTACTTGTTTTCATCCCGTTTACATCAGATGTTAAGATCAAAAGTATTTCAGTTGTTGGTGGTGCTGATGGAACAAGTCCTTGCAAGATGAGAGCGTTCATTAATCGAGATGGGATTGATTTTTCAGATGCTCAAAGTATGCAATCTATTCAGGAGTGGGATTTGGCTGAGAATTTGCAAGGAATGCTAGAATACCAGACACGGTATTCTAGATTTCAAGGTGTTGCAAGTCTCACTTTGCACTTCCCTGAGAACTTTGGTGGTGAGACAACTCAGATACGCTATATTGGGTTGAAGGGTGAAGCCACCCAGTTGAAGCGGGATGTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGA 615 0.4309 MACLHDHSCEDHDCAADWSLYKHIDLSKVSALNEAVPGSVKSVFKAWEQRLNSSEGHLESNDGDPELLVFIPFTSDVKIKSISVVGGADGTSPCKMRAFINRDGIDFSDAQSMQSIQEWDLAENLQGMLEYQTRYSRFQGVASLTLHFPENFGGETTQIRYIGLKGEATQLKRDVVATIVYEITPNPSDHKTKADSGAGFSHVE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0063 204 Pfam PITH domain 20 167 IPR010400 -
Vvi4g0063 204 ProSiteProfiles PITH domain profile. 9 184 IPR010400 -
Vvi4g0063 204 PANTHER AD039 HT014 THIOREDOXIN FAMILY TRP26 3 200 IPR045099 -
Vvi4g0063 204 SUPERFAMILY Galactose-binding domain-like 6 167 IPR008979 -
Vvi4g0063 204 Gene3D PITH domain 12 177 IPR037047 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0063 - - vvi:100255897 418.313