Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0059 ATGACTATCTTTCCGGCCGCCGTCGCCGCATTTCTAGCGCTTTCCACCTTGGTCGCTGGAGGCCGTCACTTCGCCGGAGATAATGGCCTCCTTCTACCCTCCGAAGCTTCTAGGTTCTTCCGCCCGGGTGGTGCTGCCGACGATGATACCGGCGCCGAATCTGCCGGGACCAGATGGGCGGTTCTGATAGCTGGATCTAACGGTTACTGGAATTATAGGCACCAGGCTGATATTTGCCATGCCTATCAACTCTTGAAGAAAGGTGGATTGAAAGATGAAAACATCATTGTTTTCATGTATGATGACATCTCTTTCAATGAAGAGAACCCTAGGCCTGGAATCATCATAAACAGCCCACATGGTGAAGATGTTTATGAAGGTGTACCAAAGGACTATACTGGAGAAGATGTTACTGTTGATAACTTTTTTGCTGTTATCCTTGGCAACAAAACAGCTCTTTCAGGGGGTAGTGGGAAGGTTCTGGACAGTGGTCCGAATGATCATATTTTCATATACTATTCTGATCATGGAGGTCCTGGGGTGCTCGGTATGCCAACTAGTCCTTACCTTTATGCTAATGATCTGATCGAAGTCTTAAAGAAGAAGCATGCTTCTGGTACCTATAATAGCTTGGTATTTTATCTTGAAGCTTGTGAATCTGGAAGTATATTCGAGGGCCTTCTTCCTGAAGGTCTGAATATCTATGCCACCACAGCCGCAAATGCAGAAGAAAGCAGTTGGGGAACCTATTGCCCAGGAGAGGATCCTAGTCCTCCCCCAGAATATGAAACCTGCTTGGGTGACTTGTATAGTGTTGCTTGGATGGAGGACAGTGACGTGCACAACCTGCGGACTGAAACGTTGAGGCAGCAGTATGAACTGGTTAAGAAGAGGACTGCAAATGACAATTCTGTTTATGGCTCCCATGTCATGCAATATGGTGATCTAGGTCTCAACAAGGAAGACCTTGTTCTGTATATGGGTACAAATCCTGCAAATGATAACTACACTTTTGTGGACAACAACTCCTTGAGGTTACCTTCAAAGGCTGTTAACCAGCGTGATGCTGATCTTGTTCATTTCTGGGACAAGTTCCGCAAGGCTCCCGAAGGCTCTCCAAGGAAAGCTGAAGCTCAGAAGCAGTTTCTTGAAGCAATGTCTCACAGAACACATATAGACCATGCCATAAAACTCGTTGGGAGACTTCTGTTTGGAATGAAAAAAGGTTCTGAGGTTCTGAAGACTGTCCGGCCTGCAGGGCAGCCTCTTGTTGACGACTGGCACTGCCTTAAAACACTGGTGAGAACTTTTGAGGCACACTGTGGATCCCTATCCCAGTATGGGATGAAGCACATGCGCTCCATCGCCAACATCTGCAATGCTGGCATCGAAAAGGAACAGATGGCCGAGGCATCGGCACAAGCCTGTGTCACCATTCCTCCTGGTCCATGGAGCTCTCTTGACAAGGGATTCAGTGCCTGA 1482 0.4744 MTIFPAAVAAFLALSTLVAGGRHFAGDNGLLLPSEASRFFRPGGAADDDTGAESAGTRWAVLIAGSNGYWNYRHQADICHAYQLLKKGGLKDENIIVFMYDDISFNEENPRPGIIINSPHGEDVYEGVPKDYTGEDVTVDNFFAVILGNKTALSGGSGKVLDSGPNDHIFIYYSDHGGPGVLGMPTSPYLYANDLIEVLKKKHASGTYNSLVFYLEACESGSIFEGLLPEGLNIYATTAANAEESSWGTYCPGEDPSPPPEYETCLGDLYSVAWMEDSDVHNLRTETLRQQYELVKKRTANDNSVYGSHVMQYGDLGLNKEDLVLYMGTNPANDNYTFVDNNSLRLPSKAVNQRDADLVHFWDKFRKAPEGSPRKAEAQKQFLEAMSHRTHIDHAIKLVGRLLFGMKKGSEVLKTVRPAGQPLVDDWHCLKTLVRTFEAHCGSLSQYGMKHMRSIANICNAGIEKEQMAEASAQACVTIPPGPWSSLDKGFSA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0059 493 PIRSF AE 3 493 IPR043577 GO:0004197|GO:0051603
Vvi4g0059 493 FunFam Vacuolar-processing enzyme beta-isozyme 353 480 - -
Vvi4g0059 493 PIRSF Legumain 25 493 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 FunFam Vacuolar-processing enzyme beta-isozyme 56 352 - -
Vvi4g0059 493 CDD legumain_C 355 476 - -
Vvi4g0059 493 Gene3D - 353 479 IPR046427 -
Vvi4g0059 493 PANTHER HEMOGLOBINASE FAMILY MEMBER 52 477 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 PRINTS Hemoglobinase (C13) cysteine protease signature 59 83 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 PRINTS Hemoglobinase (C13) cysteine protease signature 131 146 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 PRINTS Hemoglobinase (C13) cysteine protease signature 84 113 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 PRINTS Hemoglobinase (C13) cysteine protease signature 208 224 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 PRINTS Hemoglobinase (C13) cysteine protease signature 159 178 IPR001096 GO:0006508|GO:0008233
Vvi4g0059 493 Gene3D - 56 352 - -
Vvi4g0059 493 Pfam Peptidase C13 family 58 328 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0059 Vvi-Chr4 641507 646819 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0059 K01369 - vvi:100244137 1019.22