Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0058 ATGGAAAAGGAGGGAGTGAAAAATAACAATAATAATAGCAGCAGCATCAACAACAACAATAACAACCATAGAGAAAGAAGCGGAGGTGCAGATGATGGGTCGTTGTTGAGAGCGAGCTCTGAGCCTAGATCAACCGCTTCAGACTTTGTGTTGCAGTGGGGGAACCGCAAGCGACTCCGTTGTATGAAGATCCAAGTCAAGGACGACTCGGCCCCGGTTCACAAGACCACGGTCCGAGTCGACCGCCGAGTGGTTAGAGCTGATAAGGACTCTCTGAATCAACCCACCACCACCGCTGCAGCCACCAGTAACGGGTATTTTAATCTCCGCCACCGCCCATCTTCGCCTCAGCCACCTCCGCCTCCGCCTCCACAACGCGTTCTCAGGAACTCAGAAAATTCAAGTGCCATGAAAGGGCAAAGCAACGGCGTACGTGGGTTCTCTTCTCCGGCAAGAGACCAGGACAGGAGAGGTAATCATCACAACGCTAACAACCACCACCATAACAATGATAATAAGTCGGCCTCGTCGGAGACGGCCCACGACAGCAAGAAGGGAGGAGGAGGGTCTTCGTCGGCTGGCAGCGAGGCTGTGCCGCCCGTCTGGCCTCCTAAGTTTGTTATTGCCCTCACCAACAAAGAGAAGGAAGAAGATTTCATGGCCATTAAGGGCTCCAAACTCCCCCAGAGACCCAAGAAACGGGCCAAGTTTATTCAACGCACTCTCAATCTAGTAAGCCCCGGTGCGTGGCTATGCGATCTGACTCTAGAGCGATATGAGGTCAGGGAGAAGAAGATTTCCAAGAAGAAACCGAGGGGCTTGAAGGCAATGGGTAACATGGAATCCGACTCGGAATAG 858 0.5256 MEKEGVKNNNNNSSSINNNNNNHRERSGGADDGSLLRASSEPRSTASDFVLQWGNRKRLRCMKIQVKDDSAPVHKTTVRVDRRVVRADKDSLNQPTTTAAATSNGYFNLRHRPSSPQPPPPPPPQRVLRNSENSSAMKGQSNGVRGFSSPARDQDRRGNHHNANNHHHNNDNKSASSETAHDSKKGGGGSSSAGSEAVPPVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKFIQRTLNLVSPGAWLCDLTLERYEVREKKISKKKPRGLKAMGNMESDSE* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0058 285 MobiDBLite consensus disorder prediction 150 180 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 1 47 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 128 148 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 86 200 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 266 285 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 113 127 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 90 111 - -
Vvi4g0058 285 MobiDBLite consensus disorder prediction 7 24 - -
Vvi4g0058 285 Pfam Protein of unknown function (DUF1639) 210 259 IPR012438 -
Vvi4g0058 285 PANTHER PUTATIVE (DUF1639)-RELATED 36 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0058 Vvi-Chr4 632833 636261 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0058 - - vvi:100252590 484.182