Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0054 ATGGCTAAAAAGGTTTGTTGTTTTGAGCTGGGATTCAGAGGTGTGGGCATTTTGTTGGGAATGATTTTCATGGGAGTGAGTTATGGGGTTGTTGAGGGTAACTTAGTCGCTGGACAGAAGTCTCTGGAAGTTGGAAGGAATGTAGATACTCTCAATAGGCATGCAGTGAAAACCATTCAGAGTGAAGATGGGGATATCATTGACTGCATTGACATTTACAAGCAGCCAGCTTTTGATCATCCTGCTCTAAAGAACCACACCATCCAGACAAGGGCAGAAACCATAGCAGCAAAGCTTGGAGGCAGGAAAAGAGAGTCTTCCAGGACTGTTACATCACAGCTATGGCAGAAAAGTGGAAGCTGCCCTAAGGGAACAATCCCAGTCCTAAGGATCCAAAAGAAAGACCTACTAAAATCAAATTCAGTTGGAGAATATGGAAGAAAGAAACAACCAGGATTTACCAATGAGCTTACACTGGGTAATGACAGTGAAAATTCATATCTTCAACAAGCAAATCACTCGAAGGCAGTATTGCTTACAGAAGGCTTCAATTATTTAGGCGGTAAAGGAGATATCCAAGTTTTCAACCCTTATGTTGAGTCTGATGATGAGTACAGTACTTCTCAAGTTTGCCTAAAGCATGGGCCTTATTATGCTTATGAGAGTGTTGAATCCGGATGGGCGGTAAATCCAAGTGTTTACGGGGACAGAAAGACTCGATTGTTTGTGTATTGGACTGCTGATGCTTCAAAGACAACAGGTTGTTTCGATCTCACCTGCCCGGGTTTTATTCAAACCAGTAGTGAGATTGCTCTCGGTGCAGCAATCTATCCAATCTCAGTCCCCAGAGGGCTCCCTTATCAAATAACAATTTATATCTATAAGGATCCATACACAAATAACTGGTGGGTGCAATATGGAGGGAAAATCAACATAGGGTATTGGCCTCACAAGCTGTTCAAGATGCTAAGTTATGGGGCAGAAGCTGTTGAATGGGGAGGTGAAGTGTACAGCTCAAAGATAGGGAATTCTCCTCCTCCCCACACTGCAACAGCCATGGGAAGTGGAAAATTTCCTGGCCCGATCTTTGGCTCAGGAATGGGCAAAAGGGTTTCTTCTTCTTCTTGGTTGGGAATGGAAAATGTGTTTCTTTTGTTGGGAATAGGTTTGATTGTTTTTAGTAATGGAGTGTACGGGATGTCCAAAGAAAGAAAAGCCTCCATGGAAATGGAAATTGACAGAAAATTGAAGCTTCTAAACAAGCCTGCAGTCAAGAGCATTCAGAGTGAAGATGGAGATATTATCGACTGTGTTGACATTCACAAGCAACCCGCTTTAGATCATCCTGCACTGAAAAAGCACATTATTCAGGTTTGTCTCTGGGTGTCTCCAGCAATGAAGAAGGAGTCTTCCAAAACTGGAGGGTCTGAGGTGAAACAGATTTGGCAAAGAAGTGGAAGTTGTCCGGAGGGAACAATTCCCATTCGTAGAATCCAAAAAAAGGACCTGTTGAGAGCTGCTTCTCTTCAACACTTTGGGAGGAAGCCCCCTTCCCATCCTCTCCAAGAAAATACTATTGAACCGGACAAATCAGTAGGTCCTAACGGCACAGATGTCCCAGTCGGTCCCGAAACCAATCGATCTAAAGCGGTCCTACTTTCCTATGAATACCAATTTTTAGGAGCGAGCGGGGCGATTAATGTCTGGAAGCCAACAGTTGATTTACCTGATGATTACAGTAGTGGTCAAATTTGGCTGAAGAGCGGCAACCTGTCAAATTATGATAGTGTGGAATCAGGATGGGTGGTGTACCCGGCCTTATACGGCAATGATCAGCCTCGATCGTTCATACACTGGACTAGTGATGCATATCATACTACAGGTTGCTTTGACCTCACCTGTGCAGGGTTTGTGCAAACTAACAACAAAATATCATTTGGCACGGCTTTGGACCCCGTGTCGGTTGCATCGGGACCGCAATACGAGATCGGTGTTAGCATTTATATGGATCCGGTCACTTCTAACTGGTGGTTAGACTACGGATCCGAGACCAAAGTAGGGTATTGGCCAGGCACCCTTTTTCAAAATTTAAACTTCAGTGCCATAGTGGCTGAATGGGGAGGAGAAGTTTATAGCTCAAGGGTGTTGAACTCTCAGGCCAATCACACCACAACACAAATGGGGAGTGGAGCTTTTCCAACTAGCCTCTATGGCATTGCATCCTATGTTGCTCGCATTAGGAACATGGATTTTTCTCTTCAATGGAAGTATCCGGGAGATAAAGAAACTTATGTATCTGAGCTTCAATGCTATAATACCTTTAATGCTCTGAGCGGACCGGGGGACGAACCACGATTATTTTTTGGAGGGTCTGGTCATTGTATCCAATTTATAGATGACAAGTTTTTCACTAGAATACTATGGTTTCTGGTGCCAAATATAACGAACAAAAATTGCTATGACGAGAATGAGGGAGAAGTGTCTGCTGACTGGGGCTGGTTTTTATACTGTGCGGGGTCTGGAGGGTGGCTTGACTGTAAATGA 2544 0.4399 MAKKVCCFELGFRGVGILLGMIFMGVSYGVVEGNLVAGQKSLEVGRNVDTLNRHAVKTIQSEDGDIIDCIDIYKQPAFDHPALKNHTIQTRAETIAAKLGGRKRESSRTVTSQLWQKSGSCPKGTIPVLRIQKKDLLKSNSVGEYGRKKQPGFTNELTLGNDSENSYLQQANHSKAVLLTEGFNYLGGKGDIQVFNPYVESDDEYSTSQVCLKHGPYYAYESVESGWAVNPSVYGDRKTRLFVYWTADASKTTGCFDLTCPGFIQTSSEIALGAAIYPISVPRGLPYQITIYIYKDPYTNNWWVQYGGKINIGYWPHKLFKMLSYGAEAVEWGGEVYSSKIGNSPPPHTATAMGSGKFPGPIFGSGMGKRVSSSSWLGMENVFLLLGIGLIVFSNGVYGMSKERKASMEMEIDRKLKLLNKPAVKSIQSEDGDIIDCVDIHKQPALDHPALKKHIIQVCLWVSPAMKKESSKTGGSEVKQIWQRSGSCPEGTIPIRRIQKKDLLRAASLQHFGRKPPSHPLQENTIEPDKSVGPNGTDVPVGPETNRSKAVLLSYEYQFLGASGAINVWKPTVDLPDDYSSGQIWLKSGNLSNYDSVESGWVVYPALYGNDQPRSFIHWTSDAYHTTGCFDLTCAGFVQTNNKISFGTALDPVSVASGPQYEIGVSIYMDPVTSNWWLDYGSETKVGYWPGTLFQNLNFSAIVAEWGGEVYSSRVLNSQANHTTTQMGSGAFPTSLYGIASYVARIRNMDFSLQWKYPGDKETYVSELQCYNTFNALSGPGDEPRLFFGGSGHCIQFIDDKFFTRILWFLVPNITNKNCYDENEGEVSADWGWFLYCAGSGGWLDCK* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0054 847 Pfam Neprosin activation peptide 58 154 IPR025521 -
Vvi4g0054 847 Pfam Neprosin activation peptide 426 530 IPR025521 -
Vvi4g0054 847 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 41 359 - -
Vvi4g0054 847 Gene3D - 196 313 - -
Vvi4g0054 847 Gene3D - 570 684 - -
Vvi4g0054 847 Pfam Neprosin 577 790 IPR004314 -
Vvi4g0054 847 Pfam Neprosin 203 360 IPR004314 -
Vvi4g0054 847 MobiDBLite consensus disorder prediction 514 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0054 Vvi-Chr4 602567 609800 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0054 - - vvi:100250820 870.922