Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0053 ATGAAGAGAGGGAAAGACGAGGAAAAGATCATGGGGCCTATGTTCCCAAGGCTTCATGTTAATGATACAGAGAAAGGAGGGCCAAGAGCACCTCCAAGAAACAAGATGGCTCTCTATGAACAGCTTAGTGTACCATCTCAGAGGTGCAATCCTGGTGTCATGCCTCTCAAGTCTAACAACGCTAGCAACTTGGTGCCTCCGGCGTCATCGAGTCAGGGAAGTGGCCATGAAAGAGGTGTGTTTTTTCCGCATCACATATCTCCCTCAACTCCAACTCATCTACCAGAGAAGCTTCATGCTCGCCATTCTGATGCAGTGATTTTGAACACTCCATTGGCTCAATTTGAGCAGAGAAAGAAGCAAGGAGATGAAGATGATTTTAGAGTTCCTATATTTGTTCACTCAGGGACAGAATTTCATGGTAGAAACCAGAACAGCATAGATAGGGAAATACTTACTCCCAGCAGCTCAACTTGTTTGGGTCATTCAATAAATCTCCAAAATGCTTGTGAGAAGGAACTAAAACAAACTAGCTCCAATGGTCTTAGTGTGAGACAAGACAAGAGGAGCCAGGGTGATGTGAATCGGAAAGATTATGTGTCAAGTAGGGAGTACTCAGAAAAATCTGCCTCAAATCTGTCAACTAAAGAAAAAATTGATGAATCTATGAAGCAAGTCAATAAACCTTCAAGTGAAGATTTTCGGGATCAATCATCAGCTAATTTTAGCAGCTTACATGATACTGATGGTTGTTTACTACAAGGGAATAGAGCAGGGGCACAATTAGGAGAACCTGATCATGTTGATTGTGTTTCAGTTGAGACTGCAAGAGATGCATGGAACGCTTCTAGGGTAAGAAGTAGTTCATATTCAGGAGATGGTCTTGGTAGTCCTAGTGAACCAGATAATGACGGTGCATGTCGTGGAGACAAGACATGTGGTACATTACAAAAGGGAAATGTAGACACAAATGATGACTTATCTGAGACCTCCATGGTGGATTCTATGTCAGGCTTGGATATAACACCTGATGATGTGGTAGGAATAATAGGTCAGAAACATTTTTGGAAAGCGAGAAGAGCAATTGTCAATCAACAAAGAGTATTTGCTGTACAAGTGTTCGAGTTGCACAGACTGATAAAAGTTCAGAGATTAATTGCTGGATCACCACATCTTATGGTCGATGAGAGTGCTTATTTGGGCAAACCATCTTTAAAGAGCTCTCCTGCAAAGAAACTACCATTGGAATATGTTGTAAAACCACCGCCAAATATGGTCATGCACAAAGATGATTATGAGAGGGCAAGCCATCAATTGGAATGTTCTGCGGAAAATGCAGTTGGGAAGACACATCTTCCATCTGTGAAAAATGGTAATCCACCTTCAAATTATGGGCCTTATATAGGAAATCCACCACCAGCACCTGCGCCCACTGATAGCAAAATGGGTCCTTGGTGTTACCCTCAACCTCCTGGGCATCAATGGTTGGTTCCTGTAATGAGCCCTTCTGAAGGACTTGTGTACAAGCCGTATCCTGGCCCTGGATTCATGAGCACAGTTTGTGGAGGATGTGGACCAATGGGGTCAGCTCCCATGACAGGTAGCTTCATCAATCCAGCATATGGGGTTCCATCATCTCATCATCATCAAGGAATCGGTGTTCATCCTGGTACTCCTCCCATTGGTCATGGTTATTTTCCCCCATATGGCATGTCAGTGATGAACCACCCAACCATCTCAGGTTCAGCTGTTGAACAAATGAATCGGTTTGCTGGACATGGTTCACTCAGTCAAAGTGGTCAGTTATCAGGTGGAGGAGCCAGCTTTAACATGCAACATCAGAACTCATGTAATGTGCCAACCCCAAAGAGAGCTATTCCACAAGGTGTGAAGTTTCCAATGTCGAAGGACAGTGAGTTCCAAGGAAGCACAGCCAGTAGTCCAAGTGAGAGAGAGCAACAAGTTGGGACAGGTGACACTGCTGAAGGAAGAGACCCGCTTCCTCTTTTTCCTATGGCTCCTGCTGCCATTCCAGCAGGAGATCCCCAGCCTAATGGTACTGATCAGCCAACACGAGTGATCAGAGTTGTACCTCACAACCCTAGATCTGCAACAGAGTCAGCTGCTAGAATTTTCCAGTCCATACAAGACGAGAGAAAACAGTTGGACTCTACTTAG 2178 0.4431 MKRGKDEEKIMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSVPSQRCNPGVMPLKSNNASNLVPPASSSQGSGHERGVFFPHHISPSTPTHLPEKLHARHSDAVILNTPLAQFEQRKKQGDEDDFRVPIFVHSGTEFHGRNQNSIDREILTPSSSTCLGHSINLQNACEKELKQTSSNGLSVRQDKRSQGDVNRKDYVSSREYSEKSASNLSTKEKIDESMKQVNKPSSEDFRDQSSANFSSLHDTDGCLLQGNRAGAQLGEPDHVDCVSVETARDAWNASRVRSSSYSGDGLGSPSEPDNDGACRGDKTCGTLQKGNVDTNDDLSETSMVDSMSGLDITPDDVVGIIGQKHFWKARRAIVNQQRVFAVQVFELHRLIKVQRLIAGSPHLMVDESAYLGKPSLKSSPAKKLPLEYVVKPPPNMVMHKDDYERASHQLECSAENAVGKTHLPSVKNGNPPSNYGPYIGNPPPAPAPTDSKMGPWCYPQPPGHQWLVPVMSPSEGLVYKPYPGPGFMSTVCGGCGPMGSAPMTGSFINPAYGVPSSHHHQGIGVHPGTPPIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSGQLSGGGASFNMQHQNSCNVPTPKRAIPQGVKFPMSKDSEFQGSTASSPSEREQQVGTGDTAEGRDPLPLFPMAPAAIPAGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQSIQDERKQLDST* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0053 725 MobiDBLite consensus disorder prediction 1 33 - -
Vvi4g0053 725 MobiDBLite consensus disorder prediction 594 693 - -
Vvi4g0053 725 MobiDBLite consensus disorder prediction 282 296 - -
Vvi4g0053 725 PANTHER PROTEIN EARLY FLOWERING 3 1 721 IPR039319 GO:2000028
Vvi4g0053 725 MobiDBLite consensus disorder prediction 282 326 - -
Vvi4g0053 725 MobiDBLite consensus disorder prediction 177 241 - -
Vvi4g0053 725 MobiDBLite consensus disorder prediction 189 231 - -
Vvi4g0053 725 MobiDBLite consensus disorder prediction 637 656 - -
Vvi4g0053 725 MobiDBLite consensus disorder prediction 594 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0053 Vvi-Chr4 595981 601589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0053 K12125 - vvi:100255961 1430.62