Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0051 ATGGATTTCATGAAAGTCTTCGATCAGACGGTCCGAGAAATAAAGAGGGAGGTGAATCTGAAGGTTTTGAAGGTTCCAGAGATCGAGCAGAAGGTACTGGATGCAACCGACAATGAACCTTGGGGCCCTCATGGCTCTGCCCTGGCAGAAATAGCTCAGGCCACTAAAAAATTCACTGAATGTCAGATGGTTATGAATGTTCTGTGGACAAGATTAAGTGATTCTGGCCGAGACTGGCGCCATGTCTATAAGTCACTGGCTGTTATAGAGTATTTGGTGGCTAATGGATCTGAACGTGCTGTTGATGATATAATTGAACACACTTTCCAAATCTCATCACTTTCAGGATTTGAGTATGTTGAACCAAATGGGAAGGATGTTGGAATCAATGTGAGGAAGAAGGCTGAAACCATTGTGGCTCTTTTGAATAACAAAGAAAAAATACAAGAAGTTAGAAATAAAGCTGCTGCAAACCGCGACAAGTTCTTTGGACTTTCCTCATCTGGAGTGACATACAAGTCTAGTTCAGCCCCATATGGCAGCAGCAGCTTTCAGAGTGCTGATCAGCATGGAGGTATGAGTAGCAAACGAGAAAATGATTCATTTAGGGATAGTTATAAAGACAGGGATCGGTTTGATGAAGAAAAGGTCGACGAGGATACTTCTGCTAAGTCACGTCAAGGGGTTACCAGTGAGAATGAAGGGAACACCTTTAAAAAGGGATCTGCACGCTATAGCAGCAAGGATAAAGATACTTTGTCAACAAAGGCAAATTACTCTGACAAGTACGGGTCAATTCCCTCCCACAGTTCAAGTGTGCCTTCAATTAATGATGAAGATGATTTTGATGACTTTGATCCCCGGGGAACTTCCAGTACCAAGACCACTGCTGGAAACATTAACCAACCAGACCTGTTTGGGCAAAGTTTGATTGGTGACCTCATGGATGCACCGGCACCTGTTCCCACAGAAATGTCTGCCATCAACAGCAATTCTGCAGAGCCTGATCTGTTTGCAGATGCAACTTTTGTTTCAGCGCCACCTCATGTAGAAGAAGGTTCTAGTTCTCAGGCGAAGGTTGATCTATTTGGGTCTCAACCTGCTGGTCCTTCTGCGAATCCTCCAGCATTTGACTTTTTTGCTGCCCCTGATCCAGTTGTGCAATCAGAAACCAAGTCTCAAAAATCTGACACAGCCAGCCCCGACATTGTTGATCCATTTGCTGCAGTTCCACTAAACAGTTTTGATGGATCAGATCTTTTTGGTTCATTCACTTCCCATACCAACTCTGCATCTACAGAGCCTACACAAAGTCCTGCAAATGATGGCAACCTTAACAATTTGAATGGAAAATCCTCTGCAGAATTTCAACCTCCACCCAAGAAGGATGCTTTCCAGGTTAAATCTGGAATTTGGGCAGATTCACTGAGCCGTGGACTGATTGATCTTAATATATCCGCACCCAAGAAGATAAATCTAGCAGATGTTGGCATTGTGGGAGGATTGAGTGATGGATCGGATGAAAGGGAGAAGGGACCCCAAACTTCGTTTTCCATGGGACAAGCCATGGGTATTGGCTCCGGTCTTGGTAAATCTGGGTTTACATCTCCACCAACAGGTGGAGTTGGTGGAGATGACATCTTCTCAAGTCTCGGCAGCCAGCAATACCAATTCGGAGGCTTCAAGAAATAA 1692 0.4439 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIAQATKKFTECQMVMNVLWTRLSDSGRDWRHVYKSLAVIEYLVANGSERAVDDIIEHTFQISSLSGFEYVEPNGKDVGINVRKKAETIVALLNNKEKIQEVRNKAAANRDKFFGLSSSGVTYKSSSAPYGSSSFQSADQHGGMSSKRENDSFRDSYKDRDRFDEEKVDEDTSAKSRQGVTSENEGNTFKKGSARYSSKDKDTLSTKANYSDKYGSIPSHSSSVPSINDEDDFDDFDPRGTSSTKTTAGNINQPDLFGQSLIGDLMDAPAPVPTEMSAINSNSAEPDLFADATFVSAPPHVEEGSSSQAKVDLFGSQPAGPSANPPAFDFFAAPDPVVQSETKSQKSDTASPDIVDPFAAVPLNSFDGSDLFGSFTSHTNSASTEPTQSPANDGNLNNLNGKSSAEFQPPPKKDAFQVKSGIWADSLSRGLIDLNISAPKKINLADVGIVGGLSDGSDEREKGPQTSFSMGQAMGIGSGLGKSGFTSPPTGGVGGDDIFSSLGSQQYQFGGFKK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0051 563 MobiDBLite consensus disorder prediction 423 454 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 257 275 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 226 242 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 348 404 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 503 548 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 289 305 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 173 305 - -
Vvi4g0051 563 Pfam ENTH domain 27 147 IPR013809 -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 423 463 - -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 173 192 - -
Vvi4g0051 563 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Vvi4g0051 563 FunFam Clathrin interactor 1 18 165 - -
Vvi4g0051 563 SMART enth_2 26 152 IPR013809 -
Vvi4g0051 563 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Vvi4g0051 563 PANTHER EPSIN/ENT-RELATED 4 536 - -
Vvi4g0051 563 CDD ENTH 28 144 - -
Vvi4g0051 563 Gene3D - 24 163 IPR008942 -
Vvi4g0051 563 MobiDBLite consensus disorder prediction 193 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0051 Vvi-Chr4 572769 580066 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0051 K12471 - vvi:100264697 1075.08