Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0050 ATGTTTACGCGTTTGTTCGGGAAACCTAAGCAGGAGGCCAATGCCCTAACAACATTGGACAAGTTAAACGAGACACTTGAAATGCTAGAGAAAAAAGAAGGTGTCCTTTTGAAGAAGGCCGCTGCAGAGGTTGAAAAGGCTAAGGAATTTACTAGAGCAAAGAACAAAAGGGCGGCAATACAATGTTTAAAGAGGAAGAGGCTCTATGAACAGCAAATTGAACAACTTGGAAATTTCCAATTGCGCATTCATGATCAGATGATATTGCTAGAAGGTGCCAAAGCTACAACAGAGACTGTTGATGCATTGAGGACTGGAGCTTCTGCGATGAAGGCAATGCAAAAGGCGACGAATATTGATGATGTTGACAAAACAATGGATGAGATTAATGAGCAGACAGAGAACATGAAACAGATTCAGGAGGCATTAGCCACACCCATTGGTGCAGCAGCTGATTTTGATGAAGATGAATTGGAAGCAGAGCTTGAAGAATTAGAAGGAGCTGAATTGGAGGAACAGCTTCTCCAGCCTGCCACAACTGCCCCAGCAGCACCAATCCCTGCAGGCAGAGTACCAGCCCGCCCAGCTCCTCAGAGGAACACTGCTGAGGATGATGAGCTTGCTGCATTACAGGCAGAGATGGCACTTTAA 651 0.4531 MFTRLFGKPKQEANALTTLDKLNETLEMLEKKEGVLLKKAAAEVEKAKEFTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPAGRVPARPAPQRNTAEDDELAALQAEMAL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0050 216 Coils Coil 12 39 - -
Vvi4g0050 216 Gene3D - 13 91 - -
Vvi4g0050 216 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 192 IPR005024 GO:0007034
Vvi4g0050 216 Coils Coil 151 175 - -
Vvi4g0050 216 MobiDBLite consensus disorder prediction 175 216 - -
Vvi4g0050 216 Pfam Snf7 20 185 IPR005024 GO:0007034
Vvi4g0050 216 Coils Coil 122 142 - -
Vvi4g0050 216 Gene3D - 117 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0050 Vvi-Chr4 558059 562817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0050 K12194 - vvi:100242412 318.931