Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0046 ATGACTCTCTCTCCATCGCTGAATCATCTCCTTATCACCATTCTGTACACCCTCTCAATCCTCATCGTAAACCCTAGCTCCATTCTCGCCGGAGAAGATTCTTTCGCCGTCGACGACATCTTCTACCAGGACTACTCCCCGCCGGCACCACCGCCGCCACCGCCTCTCCCGCCCTCCGTTTCTTGCTCCGAGGATCTCCACGGTATTGGGTCTCTGGACACCACTTGTCAATTAGTTTCCAATTTGCAACTCACAGATGATGTGTATATAGAAGGGAAAGGCAATTTCTATATAGGTTCTGGCGTGAGATTGGATTGTTTGGCTTCTGGGTGTTCAATTACTGTTAACATTAGTGGGAATTTTAGTTTGGGCGAGAATGCGTCGATTGTGACCGGGGCATTCGAGCTCTCGGCATATAATTCAAGTCTTCACAATGGGTCTGTGGTGAATACCACGGCGTTAGCGGGGACCGCCCCGCCGCAGACTAGTGGGACACCTCAAGGGGTCGATGGGGCGGGCGGGGGACATGGGGGAAGGGGGGCGTGTTGTTTGGTTGACAAGAAGAAGCTTCCGGAGGATGTTTGGGGCGGGGACGCGTACTCGTGGTCTAGTTTACAGAAGCCGGTGAGTTTTGGGAGCAAGGGGGGTACGACAACTAAGGAGGAAGATTATGGTGGCCACGGTGGTGGGCGGGTAAAGATGGAGATTGCAGGGTTTCTTGTGGTTGATGGGAGTATTTTGGCTGATGGGGGTCATGGGGGGAGCAAAGGTGGAGGTGGGTCTGGTGGCAGCATCTACATCAAGGCTTATAAGATGACAGGAAGTGGCAGGATAAGTGCTTGTGGAGGTAATGGTTTTGGTGGTGGTGGTGGAGGAAGAATTTCTGTCGACGTTTTCAGTAGGCATGATGACCCAAAGATCTTTGTTCATGGAGGAAGTAGTTTTGGCTGCCCAGAAAACTCAGGTGCTGCTGGGACTTTTTATGATGCTGTTCCCCGAAGCCTTATTGTTAGCAACAACAACAGGTCAACAGATACAGACACCCTTCTTTTGGAGTTCCCTTATCAACCGCTCTGGACAAATGTTTATGTTCGAGATCATGCCAAGGCTACTGTTCCTTTACTCTGGAGTCGTGTGCAGGTCCAAGGACAAATCAGTCTGTACTGTGGTGGAGTGTTGAGCTTTGGGTTAGCACATTATGCTTTATCAGAGTTTGAACTATTGGCAGAAGAACTTTTAATGAGTGACTCCATAATTAAGGTATATGGGGCTCTACGCATGTCTGTAAAAATGTTCCTGATGTGGAATTCCAAATTACTTATAGATGGTGGAGGTGATGCCAATGTTGCAACATCTTTGCTCGAGGCTAGCAATTTGGTTGTTCTCAAGGAATCATCTGTTATACACTCTAATGCCAATCTGGGAGTTCATGGACAAGGTTTATTAAATTTATCAGGACCAGGAGACTGGATTGAAGCACAACGTCTGGTTCTGTCACTATTTTACAGTATCCATGTTGGACCTGGATCTGTATTGCGTGGCCCCTTAGAAAATGCAACAACAGATGCTGTGACACCTAGGCTATATTGTGAACTTCAAGATTGTCCCACTGAACTACTTCATCCACCTGAAGATTGCAATGTGAACTCTTCACTGTCCTTCACCCTTCAGATCTGTCGAGTTGAAGATATTACTGTTCAAGGCCTTATAAAAGGGTCCGTTGTCCATTTCCACAGGGCAAGAACTATAGCTGTCCAATCTTCTGGTAAAATAAGCACATCTAGGATGGGCTGCACCGGTGGTGTGGGTAGAGGAAAATTTTTAAGTTCTGGTCTTGGCAGTGGTGGTGGGCATGGTGGTAAGGGTGGGGATGGGTGTTACAAAGGCAGCTGTGTTGAGGGTGGTATTTCATATGGAAATGCTGATCTGCCTTGCGAACTTGGTAGTGGTAGTGGTAGTGGAAATGACACTTTAGATGGTTCAACTGCTGGTGGTGGTGTCATAGTAATGGGTTCATTGGAGCATCCACTGTCAAGTTTGTCTATTGAAGGTTCTGTTAAGGCTGATGGAGAAAGTTCCAGAGAAAGTACAAGAAATAATTATTATTCTATGAATAATGGTTCCAATGTGAATCCTGGGGGTGGCTCTGGTGGGACTATTCTTTTGTTTTTACGTTCCCTTGCTCTTGGCGAGGCTGCTGTTCTTTCAAGCATAGGAGGGCACGGCAGTCTCCATGGTGGTGGTGGAGGAGGTGGTGGGAGGATTCATTTCCATTGGTCAGACATTCCCACAGGGGATGTGTACCAACCCATAGCTAGTGTAAAAGGAAGCATCCACTCTAGGGGAGGGTTGGCTAGGGACCAGAGTGGTATGGGGGAAAATGGAACAGTGACTGGAAAAGCTTGCCCGAGAGGGCTTTATGGAATATTTTGTGAGGAATGTCCAGCTGGCACTTATAAGAATGTTACTGGATCTGATAGATCCCTTTGTCGTCATTGCCCATATCATGAGCTTCCGCGTCGTGCTATTTATATTTCTGTCCGAGGTGGTATTGCCGAAACTCCTTGTCCTTACAAATGCATTTCAGACAGATATCACATGCCACACTGTTATACAGCTCTTGAAGAGTTGATTTATACATTTGGTGGGCCTTGGCCCAGCCCCTACTCAACATGGCTCTCAAATAGATCACTCCTTCCCTTTCTTGGAGTCTTTGAATGA 2721 0.4734 MTLSPSLNHLLITILYTLSILIVNPSSILAGEDSFAVDDIFYQDYSPPAPPPPPPLPPSVSCSEDLHGIGSLDTTCQLVSNLQLTDDVYIEGKGNFYIGSGVRLDCLASGCSITVNISGNFSLGENASIVTGAFELSAYNSSLHNGSVVNTTALAGTAPPQTSGTPQGVDGAGGGHGGRGACCLVDKKKLPEDVWGGDAYSWSSLQKPVSFGSKGGTTTKEEDYGGHGGGRVKMEIAGFLVVDGSILADGGHGGSKGGGGSGGSIYIKAYKMTGSGRISACGGNGFGGGGGGRISVDVFSRHDDPKIFVHGGSSFGCPENSGAAGTFYDAVPRSLIVSNNNRSTDTDTLLLEFPYQPLWTNVYVRDHAKATVPLLWSRVQVQGQISLYCGGVLSFGLAHYALSEFELLAEELLMSDSIIKVYGALRMSVKMFLMWNSKLLIDGGGDANVATSLLEASNLVVLKESSVIHSNANLGVHGQGLLNLSGPGDWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDAVTPRLYCELQDCPTELLHPPEDCNVNSSLSFTLQICRVEDITVQGLIKGSVVHFHRARTIAVQSSGKISTSRMGCTGGVGRGKFLSSGLGSGGGHGGKGGDGCYKGSCVEGGISYGNADLPCELGSGSGSGNDTLDGSTAGGGVIVMGSLEHPLSSLSIEGSVKADGESSRESTRNNYYSMNNGSNVNPGGGSGGTILLFLRSLALGEAAVLSSIGGHGSLHGGGGGGGGRIHFHWSDIPTGDVYQPIASVKGSIHSRGGLARDQSGMGENGTVTGKACPRGLYGIFCEECPAGTYKNVTGSDRSLCRHCPYHELPRRAIYISVRGGIAETPCPYKCISDRYHMPHCYTALEELIYTFGGPWPSPYSTWLSNRSLLPFLGVFE* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0046 906 MobiDBLite consensus disorder prediction 682 701 - -
Vvi4g0046 906 PANTHER EPHRIN TYPE-B RECEPTOR 29 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0046 Vvi-Chr4 507908 528453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0046 - - vvi:100243932 1623.6