Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g0045 | ATGGGAAGCAGAGCTCTGCTTCTGCTAAAAGCAACAACGGCAGAGACTCTTCTCTTCACTTCCAAAAGCACTTTTTCCAAAGCGCTTATTCGAAATTCAACCCGAAGCTTTTCAACCCGATCCGCTCTTCTCCCTCCGGACCTGCCTCGTCTGGCTGAAACTGCTCGCATCTCTCTCACCCCACACGAGGTTGAGGAATTTGCTCCGAAAATTCGACAAGTGATAGACTGGTTTGGGCAACTTCAAGCTGTTGATCTTCAGAGTATTGAGCCGTCAATCAGAGCAGATACTGAAGGTGACAATTTGCGTGATGATTCTCCTGAAACATTTGAGAATAGGGAGGCAATAATAGCTGCTATCCCAAGCTATGAGGAGCCATATCTCAAAGTTCCCAAGGTCTTAAACAAGGACTAA | 414 | 0.4638 | MGSRALLLLKATTAETLLFTSKSTFSKALIRNSTRSFSTRSALLPPDLPRLAETARISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIEPSIRADTEGDNLRDDSPETFENREAIIAAIPSYEEPYLKVPKVLNKD* | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g0045 | 137 | Gene3D | - | 47 | 85 | - | - | |
| Vvi4g0045 | 137 | NCBIfam | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | 47 | 134 | IPR003837 | GO:0006450 | |
| Vvi4g0045 | 137 | SUPERFAMILY | Glu-tRNAGln amidotransferase C subunit | 47 | 133 | IPR036113 | GO:0006450 | |
| Vvi4g0045 | 137 | PANTHER | UNCHARACTERIZED | 22 | 136 | IPR003837 | GO:0006450 | |
| Vvi4g0045 | 137 | Pfam | Glu-tRNAGln amidotransferase C subunit | 59 | 130 | IPR003837 | GO:0006450 | |
| Vvi4g0045 | 137 | Hamap | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. | 42 | 135 | IPR003837 | GO:0006450 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g0045 | K02435 | - | vvi:100249085 | 259.61 |