Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0044 ATGTTCTCAATTGCAGCCATTAATGATACAGATTCCAAAGGTCAATGGGAACCCCTAGCGCCCACCAAGGAAGCCCAGGAATTTCATCTTTCACAAACTTATCATGAAGGACTTCGTAAATTACAAGCTAAAGAATATGAGAAGGCTCGAGAACTTTTAGAAGCTGTCCTCAAAGATCCTCTGATATCAAAGGCTCAAGTGGATAGCAATGCGACTGATGGGCATCTGTTACAGCTCAGATTTTTGGTGCTGAAGAATCTTGCCACTGTTTTCCTTCAACAAGGTTCTGACCATTATGAGAGGGCTTTAAGCTGCTACCTTCAAGCTGTAGAAATTGACACCAAGGACTCTGTTGTCTGGAACCAGCTAGGAACCTTATCATGCTCAATGGGATTATTGAGCATTTCACGTTGGGCATTTGAGCAGGGGCTTTTTTGCAGCCCTAACAATTGGAATTGCATGGAGAAACTCTTGGAAATTCTTATTGCTATTGGCGATGAGGTTGCCTGTCTTTCTGTTGCAGAATTGATCTTGAGGCACTGGCCATCACATGCTCGTGCATTGCATGTCAAAAATACCATTGAAGAGTCGGACCCAGTTCCATTTGCTCCACGAGGTATAGATAAACTGGAACCTAAACATGTTCGACTTAAATTCCCTGAAAAGAGAAAGGCAGAAGATGAAAATATAGGTGAGGGTATTTCATTGAAAAAGCAGAACCAGAATATAGATCTCCACCTGGCAGAAGCCTCATGGGCGGCCCTCACTGATGCACTGCTGGCAATCTTACATCCACTGAATGGATGTGGTTCTGAGCTGGGAGCTGAAAAAATGTGCACATCACCCAATATCAGATTAAGTATACACTTGCCTTCTAGTGCAGAAAATATTGTGCCGCCTGGTGAAAGGAAAGGGCTCAAGTTTAATCCAGTTGGTGAAAATATGTGTCTGGGTGATTGTAAGTCTGAAAGAGCAAGTACTCTAAAAGAAAAAGAAGCAAATGCTTTTGAAGAACAACCTCAGGAGAGGCGGAGTACCCGTCTTGAAAGGCTTCGGAGTCGTAAACCTGAGAAAGAAGAAGTAGATTTTGCCTCTGGTAAGGATCTGCCGAAAGCAGTAATTCAGTTTCTGGAACCTTTTATTGTTGGTGGACCAGGACTTAGAAATTCTGATCATTCTGCTAGTTCGTCTGCTTCTTGTCCTGAAAGTCAAGCTAATCTATCAGAGAATGAATGTAGTGATGTTGCTAAATTTGTGAAGGAAACTTCAAAAAATTATGGTGCTCACCATATGGGTCACTTGCTTTTAGAAGAGGTTGCAAATAGAGACCTTTTATATCAGGATTATTTTATCAAATTCCTGGAGTTGGAGAAATTGACTAGACATGGGGGCCTGGATAGAACACCTGAATGTAGTCTTTTTCTTGCTGAGCTGTACTATGACCTTGGTTCATCTTCTGAGGCATCCAGTCTGTCAGACTACATGGAGGATGTAACATACCATCTTTGTAAGATCATTGAATCAGTAGCTTTGGAATATCCTTTCCACTCAAGTGGAGTAGCCGGAAATGCAAATTGTTCTTTAACTGATAGTGGTCAAGGTGCTGGTAGAATATCACTGGACAACTCTGTTAGCCAGAATTCACTTTTAGACAGCTCATTCTTGAGCAATAAACAGTTTTTTTGGGTTCGGTTTTTCTGGTTAAGCGGGCGATTATCTATTTTGGAAGGTAACAGGGCAAAAGCTCAGAATGAATTTTTGATTTCCTTGTCACTTTTGTCTAAGAAGGAAGATACGAAAGACACTCTTGGTTCTGTCCACCTGCCATACTGCAAGTTTACTAAAGAGCTAACCATTGATAGAGTTCTCCATGAAATTAATCTATTAAAGATTGATTTCCTCCTGAAGCAGACTGTGGGTGAGATGATCGAGAAAGAAATGTATTTGGAATGTGTAAACTTAATTGCTCCACTTCTGTTCTCTACAAAAGATGCTCACCTTGACATGTTGCCTGCTAAAGAAGCTGAGGGGGTTACATCAGTTGAACTTTCTGCTATAGATGTTTTGATAAAAGCATGTGAAAAGGCAAAGCTAGTAGACACCGAGTTGTATTTGCTTTGTCACAGGAGGAAGCTGCAAATACTCACTGCCGCAGCTGGTATGGAAGAGTATCTTACTTCACACAAACCCTTCCATGAGAGGTCAGGGTCAAAAACACTTTCTGCTTCTGAAATAGAATCACAAGAAAGTTCAAGCAAGCACTGGAATTCCTTGGTGGCAGAGGAAGTGAAGGCAATTTCCCAGTGTGCATCACAAGTGAAGAGCTTCAATGATCAATGCGGAGAATCTAATGCCATTATTGTTCCGATGAGCATCATTGGTGACATTCAAACTTTGCTGCTGGCAGTCATGTGCAATTTTGCAAACACATTCCTCAAAAAGAAATCTTCTGGGCTAGTAACTGTGGATCAATCTGAGCAAAAGCAGAGATGCTGCTTTGTTGACATAGCCATTGCATTCTGCAAACTTCAACATCTCAATCCATCTACACCTGTTAAAGCTCATATTGAATTAGTTGTGGCAATCCATGACTTGCTTGCTGAGTATGGTCTCTGCTGTGCGGGTGACAGTGGCGAAGGGGAGGAAGGAACATTTCTCAAACTTGCAATAAAGCATCTACTAGCCTTGGATATGAAGCTGAAATCCAACTGTCAGTCTTCAAACAGGGAAACAACTCAATGTGATGAACAGATTTCTCATAATAATAATGTTAAAACATCTCTAAATGAATTAAAATCAGATGCATTAAATATGGAATCAGGTCGAATGGAACTAGACGAAGATCATGCTGTAGAGAAGGATGTTCTTGAACGGATGGCTACCAAAGGCATTTTATGTAAAGGTCTAGCAAAAGACACTGCAGGAGCAACATTTGGGGAACATGGCAGTGTTGGTCCTGATGGAAAGTTCAATAAAGTTGAAAAAATAAGTGATGAATTTGTTGAATGTGGAAAAGAACTTACCGAAGATGAAAGGGAGGAGCTTGAGTTAGGAATTGATAATGCTTTGGATCAATGTTTTTTCTGCTTATATGGTTTAAACCTTAGATCTGATTCTTCCTATGATGATGATCTAGCCTTGCACAAAAATACTAGCCGTGGAGATTATCAGACCAAGGAACAGTGTTCTGATGTCTTTCAATATATACTGCCCTATGCAAAGGCCTCATCTAGGACTGGGTTGATTAAACTACGGAGAGTATTGAGAGCTATACGCAAACACTTTCCACAACCTCCAGAAGATGTTTTGGTTGGAAATCCAATAGATAAATTTTTAGATGATCCTGATTTATGTGAAGATAAACTTTCAGAGGAGGCTGGATCTGATGGCTTTGTTGAATCCATAATGAAAACATTTCCTGATGCAGGAGGCATTAAACAATACAAGGCTCCATCAGTGGGGAGCTCACAGCCCTATTTGGAGGTTTATTGCAACTTGTATTATCTCTTAGCTCAGTCTGAGGAAACGAATGCAACCGATAAATGGCCTGGTTTTGTACTCACCAAGGAAGGGGAAGAATTCGTACAGCAAAATACAAACCTTTTCAAGTATGATTTAATGTATAACCCTCTACGCTTTGAGAGTTGGCAGCGACTTGCAAATATATATGATGAGGAGGTGGATTTGCTGCTAAATGATGGAAGTAAGCATATAAATGTTGCTGGATGGAGGAAGAATGCTAGTTTACCTCAGAGGGTTGAGACAAGCCGAAGGAGGAGTCGGCGGTGTTTATTAATGAGTTTGGCCTTGGCCAAGACATCAGTTCAGCAGTCTGAGATACACGAGTTATTGGCATTGGTATACTATGACAGCCTTCAGAATGTGGTACCATTTTATGATCAACGATCAGTTGTACCCTCAAAGGATGCAGCATGGACAATGTTCTGTCAGAACTCAATGAAACATTTCAAGAAAGCCTTTGCACATAAGCCAGATTGGTCACATGCATTCTACATGGGAAAACTCTCTGAGAAGCTTGGATATCCACATGAGCTATCGTTTTCTTATTATGATAAGGCTATTAATTTAAATCCATCAGCTGTGGATCCTTTCTACAGGATGCACGCTTCTCGTTTAAAGTTACTTTATACAAGTGGAAAACAGAATTTTGAGGCTTTGAAGGTTGTTGCAAGACATTCCTTTAATAAGTCAACAGAGGAGAATGTCATGAATATACTTAGTAGAATGAGTCCTGAAATTCTCAACTTACCAGCAGATGACATGGATGGAAACGCTCAAGTTAATCCTGAGGAGAGAAAGGATGCAGAATCCCATCAATTGGAAGAGGTGTGGCATATGCTTTACAGTGATTGCCTTTCTTCCCTTCAAATTTGTGTGGAAGGGGATCTCAAGCATTTTCATAAAGCCAGATATGTGCTTGCTCAAGGGCTGTACAGAAGGGGTGAACGTGGTGGTAGTGAGAGGTCAAAGGATGAACTTTCCTTTTGCTTCAAATCATCTCGCTCTTCATTTACTATTAATATGTGGGAGATTGATGGTATGGTAAAAAAAGGAAGACGCAAAACAATGGGTCTTGCTGGAAACAAGAAGGCATTGGAAGTCAACTTGCCGGAAAGTTCCCGAAAATTTATTACCTGCATTCGGAAGTACATGTTGTTCTATTTGAAACTATTGGAAGAGACTGGAGACATCTCTACCCTTGACAGGGCTTATATATCTCTTCGGGCAGATAAGAGGTTCTCACTGTGCCTTGAAGATCTTGTTCCAGTAGCTCTTGGAAGATACATTAAAGCCCTAATTTCATCCATGAGGCAAGCTGAGACGGTTGGCTCTACTGCTGCAAGCAGATCTGAGCATATGCTGGAGAAAATGTTCACGTTATTTATGGAACAGGGAAGCTTATGGCCAGATTTATGCAGTTTGCCCGAGATGAGGAGCACAGAGTTATCAGAGAGTAGCTTATATGGATACCTCTACCAATACATCCAGTTATTGGAAAGAAATGTCAGGCTGGAAACACTAGAAGCAATAAATGAGAAGATTCGGAAGCGCTTTAAGAATCCAAAGTTGGCTAATAGTAATTGTGCTAAAGTTTGCAAGCATGCTTCAGTTGCTTGGTGTCGATCTCTTATAATTAGCTTGGCCTTGATCACACCATTACATGCTGAAAGCGTGGTCCAAGCCCTTCATATGTCAGATGGTGGTTTTGAAAACACCCAGCTGCTTTGTCTTGATCTGCAAACAAATGAATTGTGGAATTCTTCATTTGAGGATCTGACCCATGTGAAAAACCTTGAAACAAAATGGGTCCCACTGTTGTCTAAAATTAAGAATCTCATTATTAGGAAAGCCTCAGATGAAAATTTGGAGACTGCCAATACTTTGCTAAGATGTTGTTACAATTTCTATCGTGAGAGCTCCAGCATAATGCTCCCATCTGGGATCAACCTTTATTCAGTGCCATCCCGGTTAGCAACAGACACACAAATTCACCTAGGAATGAATGGGGTTGAAATCGTCGATTTGAGTGTTCCTCGGAAGCTTCTTTTGTGGGCCTATACACTACTGCATGGCCGTTGCACAAGCATATCAGTGGTTGTAAAGCATTGTGAAGAAAATGCTAAGTCGAGGATGAAAAAAGGAGCAGGCACCTCTTCCACACTCCCAAATACAAGCATAACCAGTGCCACCACTACTCACACAGGTACCGGGAAAGATGGAGGTGGTGAAGCTGAGGCTGCTGCATTAGCCACAGCAGCAGCTGTTTCTTTGCCAGAAGGCGACAGCATACGTGGCCTCAATTGCTCTGGTGAGACTCAAAAGAGCTTGCTTGCTGCTCCCCATTTGCACCAGTGTACCAGCAGCAGTGCAGAAAAGAGTAATGTGAGTGTGCATGAAGCAGGAGATCCTGAGAAGGCCTAA 5943 0.4143 MFSIAAINDTDSKGQWEPLAPTKEAQEFHLSQTYHEGLRKLQAKEYEKARELLEAVLKDPLISKAQVDSNATDGHLLQLRFLVLKNLATVFLQQGSDHYERALSCYLQAVEIDTKDSVVWNQLGTLSCSMGLLSISRWAFEQGLFCSPNNWNCMEKLLEILIAIGDEVACLSVAELILRHWPSHARALHVKNTIEESDPVPFAPRGIDKLEPKHVRLKFPEKRKAEDENIGEGISLKKQNQNIDLHLAEASWAALTDALLAILHPLNGCGSELGAEKMCTSPNIRLSIHLPSSAENIVPPGERKGLKFNPVGENMCLGDCKSERASTLKEKEANAFEEQPQERRSTRLERLRSRKPEKEEVDFASGKDLPKAVIQFLEPFIVGGPGLRNSDHSASSSASCPESQANLSENECSDVAKFVKETSKNYGAHHMGHLLLEEVANRDLLYQDYFIKFLELEKLTRHGGLDRTPECSLFLAELYYDLGSSSEASSLSDYMEDVTYHLCKIIESVALEYPFHSSGVAGNANCSLTDSGQGAGRISLDNSVSQNSLLDSSFLSNKQFFWVRFFWLSGRLSILEGNRAKAQNEFLISLSLLSKKEDTKDTLGSVHLPYCKFTKELTIDRVLHEINLLKIDFLLKQTVGEMIEKEMYLECVNLIAPLLFSTKDAHLDMLPAKEAEGVTSVELSAIDVLIKACEKAKLVDTELYLLCHRRKLQILTAAAGMEEYLTSHKPFHERSGSKTLSASEIESQESSSKHWNSLVAEEVKAISQCASQVKSFNDQCGESNAIIVPMSIIGDIQTLLLAVMCNFANTFLKKKSSGLVTVDQSEQKQRCCFVDIAIAFCKLQHLNPSTPVKAHIELVVAIHDLLAEYGLCCAGDSGEGEEGTFLKLAIKHLLALDMKLKSNCQSSNRETTQCDEQISHNNNVKTSLNELKSDALNMESGRMELDEDHAVEKDVLERMATKGILCKGLAKDTAGATFGEHGSVGPDGKFNKVEKISDEFVECGKELTEDEREELELGIDNALDQCFFCLYGLNLRSDSSYDDDLALHKNTSRGDYQTKEQCSDVFQYILPYAKASSRTGLIKLRRVLRAIRKHFPQPPEDVLVGNPIDKFLDDPDLCEDKLSEEAGSDGFVESIMKTFPDAGGIKQYKAPSVGSSQPYLEVYCNLYYLLAQSEETNATDKWPGFVLTKEGEEFVQQNTNLFKYDLMYNPLRFESWQRLANIYDEEVDLLLNDGSKHINVAGWRKNASLPQRVETSRRRSRRCLLMSLALAKTSVQQSEIHELLALVYYDSLQNVVPFYDQRSVVPSKDAAWTMFCQNSMKHFKKAFAHKPDWSHAFYMGKLSEKLGYPHELSFSYYDKAINLNPSAVDPFYRMHASRLKLLYTSGKQNFEALKVVARHSFNKSTEENVMNILSRMSPEILNLPADDMDGNAQVNPEERKDAESHQLEEVWHMLYSDCLSSLQICVEGDLKHFHKARYVLAQGLYRRGERGGSERSKDELSFCFKSSRSSFTINMWEIDGMVKKGRRKTMGLAGNKKALEVNLPESSRKFITCIRKYMLFYLKLLEETGDISTLDRAYISLRADKRFSLCLEDLVPVALGRYIKALISSMRQAETVGSTAASRSEHMLEKMFTLFMEQGSLWPDLCSLPEMRSTELSESSLYGYLYQYIQLLERNVRLETLEAINEKIRKRFKNPKLANSNCAKVCKHASVAWCRSLIISLALITPLHAESVVQALHMSDGGFENTQLLCLDLQTNELWNSSFEDLTHVKNLETKWVPLLSKIKNLIIRKASDENLETANTLLRCCYNFYRESSSIMLPSGINLYSVPSRLATDTQIHLGMNGVEIVDLSVPRKLLLWAYTLLHGRCTSISVVVKHCEENAKSRMKKGAGTSSTLPNTSITSATTTHTGTGKDGGGEAEAAALATAAAVSLPEGDSIRGLNCSGETQKSLLAAPHLHQCTSSSAEKSNVSVHEAGDPEKA* 1981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0044 1980 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 13 198 - -
Vvi4g0044 1980 Gene3D Tetratricopeptide repeat domain 24 199 IPR011990 GO:0005515
Vvi4g0044 1980 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1967 IPR033053 GO:0006325
Vvi4g0044 1980 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Vvi4g0044 1980 MobiDBLite consensus disorder prediction 330 364 - -
Vvi4g0044 1980 Coils Coil 1005 1025 - -
Vvi4g0044 1980 MobiDBLite consensus disorder prediction 1884 1916 - -
Vvi4g0044 1980 MobiDBLite consensus disorder prediction 1959 1980 - -
Vvi4g0044 1980 MobiDBLite consensus disorder prediction 1886 1911 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0044 K17613 - vvi:100254195 3847.36