Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0042 ATGTCTGATCAACCCAAGCCGGTGACCCCGAAGCTCTACGACTCGGCTCCATCCTCACGCCAGGCCGTCAAGTTCTTGACGGCAGCCACCATCGGCACCATCCTCCTGGTCCTGTCCGGATTAACCTTAACCGGAACGGTGATAGCTCTGATCATCGCCACCCCAGCTCTGGTCGTGTTCAGCCCCATCCTAGTCCCGGCGGGGACAGTCATATTCCTGGCGACAACCGGGTTCTTGTTCTCTGGCTGCTGCGGCGTGACAGCGCTGATGGCATTGTCGTGGTTATACGAGTACGTAGCCGGAAAACACCCGCCGGGGGCGGATCAGCTGGACTACGCTAGGATGAGGATAGCGAATAAGGCTAGGGATATGAAGGAGAGAGCCAAGGAGTACGGACAGTACGTCCATCACAAGGCTCAGGAGGCAACTCAAGGATCTTAG 441 0.576 MSDQPKPVTPKLYDSAPSSRQAVKFLTAATIGTILLVLSGLTLTGTVIALIIATPALVVFSPILVPAGTVIFLATTGFLFSGCCGVTALMALSWLYEYVAGKHPPGADQLDYARMRIANKARDMKERAKEYGQYVHHKAQEATQGS* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0042 146 Pfam Oleosin 21 132 IPR000136 GO:0012511|GO:0016020
Vvi4g0042 146 PANTHER OLEOSIN 16 141 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0042 Vvi-Chr4 473714 474154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0042 7 136 Lipid Metabolism Gene Families AT2G25890 63.846 2.53e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0042 - - vvi:100262917 276.174