Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0039 ATGTCGACTCCAGCAGAATTCTATAATTCTCTTCCACCCATAAGCAAGGCTTATGGGACCATGTGTTTGGTTGCCACTACAGCATTCCATTTGGGATTGTTTCCGCCTATGTATACCGCTTTAATATATGAATTGGTATTCAAGCATTTTCAGGTGTGGAGGCTTGTTACAAACTTTTTTTTCCTTGGAAAATTTTCAATCAATTTTGGAATTCGCCTCTTAATGATAGCCAGATATGGGGTCCAGCTGGAGAAGGGAGTATTTGAAAGGCGCACGGCAGATTTCTTGTGGATGATGATATTTGGAGCTCTGACATTGCTGGTATTATCAGCAATCCCTCTGTTGTGGACTCCCTTCTTAGGGGTTTCATTGGTATTCATGCTTCTATATGTCTGGAGCAGGGAGTTTCCGAATGCCCAAATTAACTTATATGGACTTGTTCAACTCAAGGCATTTTATTTCCCTTGGGCAATGCTTGCTTTGGATGTTATTTTTGGTTCACAGATTCTGCCAGACCTGTTGGGAATTGTTGCAGGGCATCTATACTATTTTTTGACGGTGCTGCATCCTCTTTCCACAGGGAAGAACATATTAAAAACTCCAAGATGGGTGCATAAACTGGTTGCCCGCTTCAGAATTGGATATCCGACAACTGCACCTGCCCAGCCTGAACGGGCAGCCGGCGTGGCTTTCAGAGGAAGAGGTTACCGGCTAAATGGATGA 723 0.4357 MSTPAEFYNSLPPISKAYGTMCLVATTAFHLGLFPPMYTALIYELVFKHFQVWRLVTNFFFLGKFSINFGIRLLMIARYGVQLEKGVFERRTADFLWMMIFGALTLLVLSAIPLLWTPFLGVSLVFMLLYVWSREFPNAQINLYGLVQLKAFYFPWAMLALDVIFGSQILPDLLGIVAGHLYYFLTVLHPLSTGKNILKTPRWVHKLVARFRIGYPTTAPAQPERAAGVAFRGRGYRLNG* 241
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0039 240 SUPERFAMILY Rhomboid-like 9 186 IPR035952 -
Vvi4g0039 240 Pfam Der1-like family 11 201 IPR007599 -
Vvi4g0039 240 PANTHER DER1-LIKE PROTEIN, DERLIN 1 214 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g0039 Vvi-Chr4 451271 455945 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0039 K13989 - vvi:100250894 491.115