Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0024 ATGACACTTACCCCGCCACTTACAATAATTTCCGAAAATCTGGACGATGAACTATCAATCCTACTAGACGTTAAACAACAACTAGGCAATCCCCCGTCACTCCAATCTTGGAATTCCTCATCCTCACTCTGTGATTGGCCGGAAATTACATGCATCGACAATATCGTCACTGAAATTTCACTCAGCTACAAGACCATCACAAAGAAAATTTCGGCTAGAATTTGTGACCTCAAGAACCTTATCGTACTTGACAAAAACTTCTTCGTGGGTTCAATTCCAGCTGACATTGATCGACTTTCACAGTTTGGCGCATTGAAGAAGTTGAAATATCTGTGGATGACGGAGGCGAATTTGATTGGCGAAATACCGGAGAGCTTCAACAATCTATCGAGTTTGGAACTCTTGGACCTCTTAGTCAACAAATTGGAAGGTACGATCCCGGGAGGCATGCTTACGTTGAAGAATTTGAACTATTTGCATTTATTCATTAATAGATTGTCCGGCCACATTCCTTCATCCATAGAAGCTCTCAACCTGAAAGAAATTGATATTTCCGACAACCATTTGACGGGGTCCATACCAACGGGTTTCGAGAAGCTACAAAATTTGACGGGTTTGAATCTTTTCTGGAATCAGTTGTCAGGAGAGATACCAGCAAATATAAGCCTCATTCCTACACTGGAAACCTTCAAAGTTTTTAGCAATCAATTGAGTGGAGTTTTACCTCCAACATTTGGCCTTCATTCGGAGCTCAAACTCTTTGAGGTTTCCGAGAATAAACTAAGCAGGGAATTACCTCAACATTTATGCGCTAAGGGGGCTTTGCTTGGAGTGGTCGCTTCCAACAACAATCTCAGCGGGGAAGTGCCCATGTCCCTCGGGAATTGCACAAATGGAAACTCATTCTCAAGGACACTTCCAAGTAAATTGGCAAGGAATTTCGCTCAATAA 951 0.4227 MTLTPPLTIISENLDDELSILLDVKQQLGNPPSLQSWNSSSSLCDWPEITCIDNIVTEISLSYKTITKKISARICDLKNLIVLDKNFFVGSIPADIDRLSQFGALKKLKYLWMTEANLIGEIPESFNNLSSLELLDLLVNKLEGTIPGGMLTLKNLNYLHLFINRLSGHIPSSIEALNLKEIDISDNHLTGSIPTGFEKLQNLTGLNLFWNQLSGEIPANISLIPTLETFKVFSNQLSGVLPPTFGLHSELKLFEVSENKLSRELPQHLCAKGALLGVVASNNNLSGEVPMSLGNCTNGNSFSRTLPSKLARNFAQ* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0024 316 Pfam Leucine rich repeat N-terminal domain 15 51 IPR013210 -
Vvi4g0024 316 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 311 - -
Vvi4g0024 316 SUPERFAMILY L domain-like 18 298 - -
Vvi4g0024 316 Gene3D Ribonuclease Inhibitor 84 316 IPR032675 -
Vvi4g0024 316 Gene3D Ribonuclease Inhibitor 8 83 IPR032675 -
Vvi4g0024 316 FunFam Predicted protein 177 274 - -
Vvi4g0024 316 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 100 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0024 Vvi-Chr4 258119 279395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0024 72 310 Receptor kinase-like Gene Family AT5G25930 45.318 1.05e-60 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0024 K00924 - vvi:100262856 376.711