Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0018 ATGGCAAGTGAGGTTGATGATAATAGAGGTATTCAGAATGAGGTCTGTGACTCTGGTTTGGGTTCTCACAAAGTTGCAGATGCAGATTTGGACGATGATGGCAGACCCAGAAGAACTGGGTCTCTGTGGACAGCATGTGCACTCGTAATAACAGCTGTTATAGGCGCTGGAGTGCTCTCGCTCGCCTGGAGCCTGGCGCAGCTTGGATGGGTTGGTGTATTAGTTCTCATAATATTTGGCATCATCACATTCTACACTTCCAATCTCTTAGCAGAATGTTACAGATGCCCAGTCACTGGCAAGAGAAACTATACTTATATGCAGGCTGTCAAAGCCAATCTAGGTGGAAAAATGTATATGGCTTGTGGGTTGGCTCAATACAGCCTCCTAATTGGACTGGCAATTGGCTATACCATCACTGCAGCAATAAGCATGGTGGCTATACAGAAATCGAATTGCTTCCACAAAAGAGGCCATGAAGCCCCTTGCGAGGTTTCGCATAAACCATACATGATAGGGATGGGACTCTTTGAAATTGTGGTGTCTCAGATACCGGATATTGGTGAAATGTGGGGGCTGTCTGTCATAGCAACAGTTACATCTTTCGGGTATGCCTCAATTGGAGCTGCACTCGCCTTTTCAACTGTCATCTCAGGGCATGGAAAGAGGACCAGTGTGACTGGTGTTGAGGTTGGGCCGGGCATAACTGCAGCTCAGAAGATGTGGAGGATGTTCAGAGCAATTGGAGACATGTTGTTATGCAGCTCATACTCTGCAATTCTGATTGAAATCCAGGATACATTGAAATCTTCAGGGTCAGAAATCCAAGTAATGAAGAAGGCTAACATGATAAGTGTGTCAACAACAACCTTATTCTACTTGATTTGTGCTTGCTTTGGCTATGCTGCATTCGGGAACAACGCCCATGGCAACATGCTAACTGGCTTTGGATTTTACGAGCCCTTCTGGCTCATCGACTTGGCCAACACCTTCATTGTGATGCACCTTGTGGGAGCATACCAGGTGGTTTCACAACCAGTGTTTGGTGCAGTTGAATCACAGATGAGAAGGTGGTGGCCAAGGTCCAAGTTTGTAATTGCTGAGTACCCCATAAGAATTGGGAAGAAAAACTTCAACATGAGTATCAATTTGTTAAGGCTGACTTGGAGAAGCATGTTTGTAGTGATTATAACTTTGCTGGCTTTGGCATTGCCCTACTTCAATGAAGTGCTGGCACTGCTTGGAGCTATTAGTTTCTGGCCACTGACAGTTTACTTCCCAGTGAATATGTACATTGTGCAAAAGAAGATCAGTCGATGGACAATTAGGTGGTTTGGGCTGCAGTCACTGAACTTTGTGTGTCTGCTTGTGGCCTTGGCTGCAGCCTGCGGCTCCATTGAAGGGTTTGCTGAGGCTCTCCATATCTTCAAGCACTCCTAA 1440 0.4583 MASEVDDNRGIQNEVCDSGLGSHKVADADLDDDGRPRRTGSLWTACALVITAVIGAGVLSLAWSLAQLGWVGVLVLIIFGIITFYTSNLLAECYRCPVTGKRNYTYMQAVKANLGGKMYMACGLAQYSLLIGLAIGYTITAAISMVAIQKSNCFHKRGHEAPCEVSHKPYMIGMGLFEIVVSQIPDIGEMWGLSVIATVTSFGYASIGAALAFSTVISGHGKRTSVTGVEVGPGITAAQKMWRMFRAIGDMLLCSSYSAILIEIQDTLKSSGSEIQVMKKANMISVSTTTLFYLICACFGYAAFGNNAHGNMLTGFGFYEPFWLIDLANTFIVMHLVGAYQVVSQPVFGAVESQMRRWWPRSKFVIAEYPIRIGKKNFNMSINLLRLTWRSMFVVIITLLALALPYFNEVLALLGAISFWPLTVYFPVNMYIVQKKISRWTIRWFGLQSLNFVCLLVALAAACGSIEGFAEALHIFKHS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0018 479 PANTHER OS05G0424000 PROTEIN-RELATED 42 466 - -
Vvi4g0018 479 Pfam Transmembrane amino acid transporter protein 38 466 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0018 Vvi-Chr4 191987 194565 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0018 7 477 Organic Solute Cotransporters AT1G58360 51.983 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0018 K24917 - vvi:100250828 936.406