Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0016 ATGTTGATATGCTGTTCATATTCTGCAGTTCTGATTGAAATCCAGGACACGCTAAAATCATCCAAGTCAGAAATCAAAGTGATGAAGAAGGTTGACATGATGACTGCGTTAATCATGACATTTTTCTACTTGTTATGTGCTTGCTTTGGTTATGCTGCATTTGGGAACAATGCCCATGGCAACATGCTGACGGGCTTTGGATTTTTTGAGCCCTTCTGGCTCATCGACTTGGCCAATATCTTCATTGCCATGCGCCTTGTGGGAGCATATCAGGTACTGACACAACCAGTGTTTGTTGCAGCTGAATCACATATCAGAAAGAGGTGGCCTAAGTCCAAGTTCATAACCCGCGAATATCCAATAAGCATTGGCAAGATAAACTTGAACTTGAACATCAATTTCTTCAGGCTGACTTGGAGAACCATGTTCGTGGTGATTGCAAATTTACTTGCTCTGGCACTGCCCTTCTTCAACGAAGTGCTAGCATTCCGTGGAGCCATCAGCTACTGGTCTCTCACAGTTTATTTCCCAGTGAATATGTACATTGCCCAAAACAAAATTAGTTGA 567 0.425 MLICCSYSAVLIEIQDTLKSSKSEIKVMKKVDMMTALIMTFFYLLCACFGYAAFGNNAHGNMLTGFGFFEPFWLIDLANIFIAMRLVGAYQVLTQPVFVAAESHIRKRWPKSKFITREYPISIGKINLNLNINFFRLTWRTMFVVIANLLALALPFFNEVLAFRGAISYWSLTVYFPVNMYIAQNKIS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0016 188 PANTHER OS05G0424000 PROTEIN-RELATED 2 187 - -
Vvi4g0016 188 Pfam Transmembrane amino acid transporter protein 6 186 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0016 Vvi-Chr4 183115 183936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0016 6 187 Organic Solute Cotransporters AT5G49630 57.377 1.92e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0016 K24917 - vvi:100250828 283.108