Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0015 ATGGTGAACAGGGTGGTTGGTGATGAAGATATCATTCAAAATAGCGAATGTGATTCTGGTTTGGATCCTCAGAAAGTTGCGGATGGAGATTTTGATGAAGATGGCAGATCCAAAAGAACTGGGACTGTGTGGACGGTAACCGCACACATAGTGACAGTGGTGGTAGGCTTCGGGGTGCTGTCGCTGCCCTGGGGTGTGGCTCAGCTTGGATGGCTTGCTGGTGTTGCAACTCTACTTGTATTTGGCATCATCACATTCTACACTTCCAGTCTATTGGCAGAATGTTACAAGTCTCCTGTTACTGGCAAAAGAAACTACACTTACATGCAGGCTGTCAAAACCACCTTGGGTGGAAAGATGTACATGGTTTGTGGATTGGTTCAATACGCCATCGTGACTGGGTCGATTATCGGCTTTACACTCACGGCATCAATAAGCATGGAAGCCATACTTAAATCAGATTGCTACCACAAAAGCGGTCATGATGCCTCGTGCCAGTTCTCTCATAGACCATACATGATAGGTATGGGAATCTTCGAAATCTTTCTGTCTCAGGTACCCAAGATTGACCATGTATGGTGGCTCTCCATCATGGCAACACTCACTTCTTTGGGGTATTCCTTCATCGGAGTTGGGCTTGCCTTGGCTACAATCATCTCGGGGCATGGAAAGAGGACTTCTGTTACTGGAATTGAAATAGGGCCGGGTATAACTCCAGCTCAGAAAATCTGGAGGATGTTCAGAGCTCTCGGAAACATTGCATTAGCTTACTCATATTCTCTCGTTTTGATTGAAGTCCAGGACACAATCAAATCTTCCAAGTCCGAAATTAAAGTGATGAAGAAAGCCAACATGGCAGGGGTGTTGATAACAACAACGCTGTACTTGTCATGTGCATGCTTTGGCTACGCTGCATTCGGGAACTATGCACATGGCAACATGCTGACCGGCTTCGGATTTTATGAGCCCTTCTGGCTCATCGACTTGGCCAACATCTTCATTGTGGTGCATCTAGTGGGTGCATATCAGGTACTTGCACAACCCGTATTTAGTGCGGTTGAATCACAAGCCAGGCGGAGGTGGCCTATGTCCAAGTTTGTAACGGCGGAATACCCAGTTGGAATTGGCAACAAAACCTTGAATTTCAGCATCAACTTCTTAAGACTAACTTGGAGAACCGTCTTTGTGGGGCTTGTAACTTCGGTTGCTATGGCATTCCCCTTCTTCAACGAGGTACTTGCACTCCTTGGAGCCATTAGCTATTGGCCGCTAACAGTCTATTTCCCAGTGAATATGTACATTGCCCAAAAGAAAATTAGTCCAAGAACGATTAGGTGGTTTGGGCTCCAATTACTGAACTTTGTTTGTCTTCTTGTGGCCTTGGCTTCAGCATGTGGCTCAGTTGAAGGGTTTGGTGAGGCTCTCCTCTTGATAGTGGTTCCGCTTCCAGAGTTGGTTCACAAAACAAGTGAGATATTAACTCAACCTTCTGCTCTTTTCAACCTCATTTCCATATCGGTTTTTAATTTCACTGTTTCAAAGCTAATTAAATTGTCATTTTGTTGGTGCAGTTTGGTCGGTGAAAAGAGAAGGAAAGGGACGATGGTGAGAATGGTGAATGAGGGTGATGATAGAGATATTGAGAAGGAGGGGTGTGAAGATGGCTTGGGTGGTAATGAAGTTGCAGATGGAAATTTTGACGAGGATGGCAGACTCAGAAGAGCTGGTATAATGAAACTTGTCCATGGCGCCTTTTGGTTGCTTATGCATTAA 1773 0.4529 MVNRVVGDEDIIQNSECDSGLDPQKVADGDFDEDGRSKRTGTVWTVTAHIVTVVVGFGVLSLPWGVAQLGWLAGVATLLVFGIITFYTSSLLAECYKSPVTGKRNYTYMQAVKTTLGGKMYMVCGLVQYAIVTGSIIGFTLTASISMEAILKSDCYHKSGHDASCQFSHRPYMIGMGIFEIFLSQVPKIDHVWWLSIMATLTSLGYSFIGVGLALATIISGHGKRTSVTGIEIGPGITPAQKIWRMFRALGNIALAYSYSLVLIEVQDTIKSSKSEIKVMKKANMAGVLITTTLYLSCACFGYAAFGNYAHGNMLTGFGFYEPFWLIDLANIFIVVHLVGAYQVLAQPVFSAVESQARRRWPMSKFVTAEYPVGIGNKTLNFSINFLRLTWRTVFVGLVTSVAMAFPFFNEVLALLGAISYWPLTVYFPVNMYIAQKKISPRTIRWFGLQLLNFVCLLVALASACGSVEGFGEALLLIVVPLPELVHKTSEILTQPSALFNLISISVFNFTVSKLIKLSFCWCSLVGEKRRKGTMVRMVNEGDDRDIEKEGCEDGLGGNEVADGNFDEDGRLRRAGIMKLVHGAFWLLMH* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0015 590 PANTHER OS05G0424000 PROTEIN-RELATED 41 467 - -
Vvi4g0015 590 Pfam Transmembrane amino acid transporter protein 39 468 IPR013057 -
Vvi4g0015 590 MobiDBLite consensus disorder prediction 16 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0015 Vvi-Chr4 176405 181717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0015 13 470 Organic Solute Cotransporters AT1G58360 52.814 2.83e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0015 K24917 - vvi:100259319 954.125