Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0014 ATGGAGGAGGTTGATGGACAAGTTATTCAGTTTGTGGAATGTGAATCTGGTTTGGATATTCACAAAGTTGTAAGGGAAGATTTGGATGATGATGGCAGACCCAAAAGAACTGGGACAATGTGGACAGCAAGTGCACACATAATAACAGCGGTTATAGGCTCTGGGGTGCTGTCACTGGCCTGGGCTGTGGCACAGCTTGGATGGGTTGCAGGAGTAGCCTCTCTACTAACATATGGCTGCATAACGTTCTATACTTCCAATCTCTTAGCAGAGTGTTACAGATCTCCAGGCACTGGCAAGAGGAACTACACTTACATGGAAGCTGTCAAAGACAATTTAGGAGGAAAAATGAACTTTGCTTGTGGAATGGCTCAGTATGCCAATCTTAATGGGCTGGTAGTTGGCTATACTGTTACTGCAGCAATAAGCATGGTGGCTATAGAGAAATCGAACTGCTTCCACAGAAGGGGTCATGAAGCCTCATGCGAGGTTTCCCATAAACCATACATGATAGGACTTGGCCTCTTTGAGATCGTTTTGTCTCAGATACCCAACATTGAGCAGGTCTGGTGGCTCTCCATTATGGCATCAATCATGTCTTTTGGGTACTCCTCCATTGGAGCTGGACTTGCCTTTGCAATCATGCTTTCAGGTCATGGAAAGAGGACCACTGTGACCGGAGTGGAAGTTGGGCCAGGCTTAACTGCAGCTCGGAAAATGTGGAGGATGTTCACAGCACTTGGAGACATTGCAATAGCTTACTCATATTCCCCAGTTCTGATTGAAGTCCAGGACACATTAAGCTCTTCCAAGCCTGAAATCAAAGTGATGAAGAAGGCTAACATGATATCAGTGGCTGCCACCACCGTATTCTACATGATGTGCGGTTGTCTCGGCTATGCTGCATTCGGAAACAGTGCACCTGGCAACATGCTGATTGGCTTTGGATTTTACGAGCCCTTCTGGCTGATTGACTTGGCCAACATCTTCATTGTGTTGCACCTTGTGGGAGCATATCAGGTAATGGCACAACCAGTATTTTGCGAGGTTGAGTCTTTGTGTAGAAGAAAGTGGCCTAAGTCGGAGTTTGTAAACAGAGAGTACCCCATAAAAATTGGCAGAAGAAACTTGAATTTCAGCATCAACTTGTTCAGGCTGGTTTGGAGAACCATGTATGTGGTGGTTGCAACTGGGTTGGCTCTAGCATTGCCCTTTTTCAATGACTTACTGGCACTCATTGGAGCAGTGAGCTTCTGGCCCCTCACAGTCTATTTCCCGATCACAATGTACATTTCCAGAAAGAAGATCAATCGAGCAACAATTAGGTGGTTCATGCTGCAGTTTGTGAACTTGTTGTCTCTCCTCATTGCATTGGCTGCAGCATGTGGCTCCATTGAAGGGTTGGGTGAAGCTCTCCGTATCATCAAATAA 1431 0.4591 MEEVDGQVIQFVECESGLDIHKVVREDLDDDGRPKRTGTMWTASAHIITAVIGSGVLSLAWAVAQLGWVAGVASLLTYGCITFYTSNLLAECYRSPGTGKRNYTYMEAVKDNLGGKMNFACGMAQYANLNGLVVGYTVTAAISMVAIEKSNCFHRRGHEASCEVSHKPYMIGLGLFEIVLSQIPNIEQVWWLSIMASIMSFGYSSIGAGLAFAIMLSGHGKRTTVTGVEVGPGLTAARKMWRMFTALGDIAIAYSYSPVLIEVQDTLSSSKPEIKVMKKANMISVAATTVFYMMCGCLGYAAFGNSAPGNMLIGFGFYEPFWLIDLANIFIVLHLVGAYQVMAQPVFCEVESLCRRKWPKSEFVNREYPIKIGRRNLNFSINLFRLVWRTMYVVVATGLALALPFFNDLLALIGAVSFWPLTVYFPITMYISRKKINRATIRWFMLQFVNLLSLLIALAAACGSIEGLGEALRIIK* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0014 476 Pfam Transmembrane amino acid transporter protein 36 465 IPR013057 -
Vvi4g0014 476 PANTHER OS05G0424000 PROTEIN-RELATED 38 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0014 Vvi-Chr4 172218 174712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0014 26 476 Organic Solute Cotransporters AT1G10010 56.733 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0014 K24917 - vvi:100264491 949.888