Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0013 ATGGAGAATGAAGTATGTGAGAGTGGTTTGGATACTGGGAAAGTCGCAGATGTTGGAGAGGTAGATGATGATGGGAGACCCAAAAGAACTGGGACTTTGTGGACAGCAAGCGCACATATAATAACGGCTGTTATTGGGTCCGGGGTGCTGTCGCTGGCGTGGTGTGTGGCTCAGCTTGGATGGGTTGTGGGAGTGGCCACTCTCTTAATATTTGCTTGCATCACACTCTATACCTCCAATCTCCTAGCAGAGTGTTACAGGTCTCCGGGCACTGGCAAGAGAAACTATACATATATGAATGTTGTCAAAGCCAATTTAGGTGGAAGAATGAATATTGCTTGTGGATTGGCTCAGCAAGCCAACCTCAATGGGCTGGTGGTTGGCTATACTATTACTGCTGCAATAAGCATGGTGGCTATACGGAGATCGAACTGCTTCCATGAGAAGGGTCACCAAGCCTCATGCCAGTTTTCATCTAAACCATATATGATAGGAATTGGGGCCTTGGAAATCATACTGTCTCAGATGCGGAACATTGAGGAGCTGTGGTGGCTCTCAGTAATTGCAACAATCACCTCTTTTGGGTACTCCTCCATTGGAGCTGGACTTGCCTTGGCTACTATAGTTTCGGGACATGGAAAGAGGACGACTGTGACCGGAATTGAAGTTGGGCCAGGATTAACTGCAGCTCAGAAAATGTGGAGGATGTTTACAGCATTTGGCGACATTGCAATAGCTTACACATATACCCCAGTTCTGATTGAAGTCCAGGACACAATAAAATCTTCAGAGCCTGAAAACAAGGTGATGAAGAAGGCTAACATTCTATCAGTGTCAGCCACAACAGTATTCTACATGATGTGTGCATGCTTTGGCTACGCTGCATTCGGGAACTATGCGCATGGCAACATGCTCACCGGCTTTGGATTCTACGAGCCCTTCTGGCTCATCGACCTGGCCAACATCTTCATTGTGCTGCACCTTGTGGGAGCATACCAGGTAATGGCACAGCCAGTGTTTGGCACGGTGGAATCCTGCATCAAAAGAAGATGGCCTGAGTCTAAGTTTGTAAACAAGGAGTACCCAGTAAAAATTGGCCACAAGAGCTTGAATTTCAGCATCAACTTCTTAAGGCTGACTTGGAGAAGCATGTATGTGGTGGTAGCAACTTTGGTGGCCATAGCACTGCCCTATTTCAACGATGTGCTCGCCCTGCTTGGAGCCGTTAGCTACTGGCCTTTGACGGTTTATTTCCCTGTCACAATGTACATAGCCAGAAAAAAGATTAATCGAGGAACAATTAAGTGGTTTGCGCTGCAGTTACTGACCTTAGTGTCTCTGCTCCTGGCCATGGTTGCAGCATGTGGGTCAATTGAGGGGTTTGGTGAAGCTTTCCGTATCTTCAAGCCCTCTCTGGTTGAAGAATAG 1428 0.4706 MENEVCESGLDTGKVADVGEVDDDGRPKRTGTLWTASAHIITAVIGSGVLSLAWCVAQLGWVVGVATLLIFACITLYTSNLLAECYRSPGTGKRNYTYMNVVKANLGGRMNIACGLAQQANLNGLVVGYTITAAISMVAIRRSNCFHEKGHQASCQFSSKPYMIGIGALEIILSQMRNIEELWWLSVIATITSFGYSSIGAGLALATIVSGHGKRTTVTGIEVGPGLTAAQKMWRMFTAFGDIAIAYTYTPVLIEVQDTIKSSEPENKVMKKANILSVSATTVFYMMCACFGYAAFGNYAHGNMLTGFGFYEPFWLIDLANIFIVLHLVGAYQVMAQPVFGTVESCIKRRWPESKFVNKEYPVKIGHKSLNFSINFLRLTWRSMYVVVATLVAIALPYFNDVLALLGAVSYWPLTVYFPVTMYIARKKINRGTIKWFALQLLTLVSLLLAMVAACGSIEGFGEAFRIFKPSLVEE* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0013 475 PANTHER OS05G0424000 PROTEIN-RELATED 32 458 - -
Vvi4g0013 475 Pfam Transmembrane amino acid transporter protein 29 453 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0013 Vvi-Chr4 166624 170092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0013 8 470 Organic Solute Cotransporters AT1G10010 56.559 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0013 K24917 - vvi:100242211 942.954