Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0007 ATGGATCGCCTTCGCCCTAGAGAGAGACGGCTGTTTTCTGGCTTCACAAAACTCGAGGTGGAAAAAATGGAGAAGGTGCTCAAGGAATCAGGAGAACAGGCATTGAACCCAGATTTCTGCAAAAGACTAACGGGTGGTTTTAATCGCTCTTCAGGTCGTGCTGGGAAACCTGCTATAAAATGGATTGAGGTGCAAAGTTGGTTTCAGGATAGGCTACAAGAGTGCACGCACAAAGTTTCTTGTCCACCTAATGTCTCCAAGGAACTGTGTGTTTTACCAGAAACATTCCCTTCAAATAAGCTACATGAAAGTTCTCAAATGCCTGAAGGAGACCCAGATTTATCAGAATTAGAATTTGAGGCACGGTCATCCAAAGATGGGGCTTGGTATGATGTTGATACATTCCTCACCCACAGATTTCTTAGTTCAGGTGAACTTGAAGTTCGTGTAAGATTTGTTGGATTTGGGGCTGAGGAGGATGAATGGGTAAATGTGAAAAAGGCGGTGCGTGAACGCTCTCTCCCCCTGGAGCATTCAGAATGTCACAAAGTTAAGGTTGGAGACGTCGTTCTCTGCTTCCAGGAAAGGAGGGATCAAGCAATCTACTATGATGCCCATGTTGTAGAAATTCAAAGAAAAATGCATGATATAAGGGGATGCAGGTGTCTCTTCTTGATTCGATATGACCATGACAACACAGAGGAAAGAGTTCATCTGAGGAGATTATGTTGCAGGCCAACATGTTAA 747 0.4404 MDRLRPRERRLFSGFTKLEVEKMEKVLKESGEQALNPDFCKRLTGGFNRSSGRAGKPAIKWIEVQSWFQDRLQECTHKVSCPPNVSKELCVLPETFPSNKLHESSQMPEGDPDLSELEFEARSSKDGAWYDVDTFLTHRFLSSGELEVRVRFVGFGAEEDEWVNVKKAVRERSLPLEHSECHKVKVGDVVLCFQERRDQAIYYDAHVVEIQRKMHDIRGCRCLFLIRYDHDNTEERVHLRRLCCRPTC* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0007 248 Pfam SAWADEE domain 116 243 IPR032001 GO:0003682
Vvi4g0007 248 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 247 IPR039276 -
Vvi4g0007 248 Gene3D - 176 248 - -
Vvi4g0007 248 Gene3D - 114 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0007 Vvi-Chr4 81934 94619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0007 - - vri:117912557 507.294