Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0005 ATGGAATCAATTCCACCAGTGGTGACTAAGAAACTGTTGAACACAGTACGTATTGTGTTATTCATGTTGAGAAAGGGTCTGACGAAAAGCAAACTCATGATTGATCTCTGCCAAATCATCATGAAATGCGGCAAGATCCTAGGGAAGGAGGTGAACGAACTCATGCTCCGCCATCACACAACCCTCGATTCCCTCAGCTGCCGCTCACGTGACCTCCACATGTCCTTCGTTTCCCCTCACGATTACGAGTTCAGTTGCAGCAACAGCCCCGCCTACCCCTTCCACCTCACCAAGCGCAAGGCCCATTTCACCTACACCTTCAGCAACCGCCCCCGCCATCATTACGCCCGCTATCACGCTCCCACGGCGGATAACGACGTTGCTGCGGTGACTGTCATGAAGACGATGCTCGAAATGTTGAGTGGTGATGTGGCGGCGTCGCCTTTGATGGGAGCGGCGTTCGGGCGGAGCCCAGTGGCCGTGCGGCAATTGAGGGTCACTGACTCGCCCTTCCCTTTGAAGGATGATGACGTGGACTGCCACGTGGACAAAGCTGCTGACGAGTTTATTGAGAGGTTTTACAAGGAGTTGCGGCGGCAGAAGTGGAAGGCTGCGCAAGAAGCAGCCTATTATTATGGTTGA 642 0.5358 MESIPPVVTKKLLNTVRIVLFMLRKGLTKSKLMIDLCQIIMKCGKILGKEVNELMLRHHTTLDSLSCRSRDLHMSFVSPHDYEFSCSNSPAYPFHLTKRKAHFTYTFSNRPRHHYARYHAPTADNDVAAVTVMKTMLEMLSGDVAASPLMGAAFGRSPVAVRQLRVTDSPFPLKDDDVDCHVDKAADEFIERFYKELRRQKWKAAQEAAYYYG* 214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0005 213 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 6 207 - -
Vvi4g0005 213 Pfam Cotton fibre expressed protein 181 201 IPR008480 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g0005 Vvi-Chr4 55349 55990 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0005 - - vvi:100250983 436.802