Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1317 ATGTCTATTCTTCCTCCAGGCCCTTTGCAATCTCAATGTCAAGACCAGTCCAACAATGCGATATCTTCGTGGGTTTATCAATGGTCATCTCCTCCACCTTGGTGTGGGTCGAGGGCAATTAGGATTTCAAGGCCAAAGGGTGCTTGTAAACGCAGACAGGCAGTAATATCTCAAGCAGCTTCCGTAGAGGCGCTGCCCGCACTTGCAGATGGGAGAGGCAGCACCGCCATACAAGTCTTGCGAGGGGCCAGGGATCGAGCCAACGATATGCAGGCCGAGGCCAAGGCTATGGCCCGTGCCGCTAATGCCTCCGTCTACACTCCCGAGCTTGTTTCCAACAAATACCGCTCTCGCCCTATCAAGGTATTGCGGAGGACTATGGAAATTCTTATTGGCGTTGGTTCATTTGCCTTGAAACTTGTGCTGGACCAAAGCAACGGGCAGCTAGATCAAAATAAAAGAATTCGGGCGGTTGATCTGAGGAAGATTTGCACGAAATTGGGCCCAACTTTTGTGAAGATAGGTCAGGGCTTGTCCACAAGGCCCGACCTTTGTCCACCTGAGTATCTCGAGGAGCTCTCTCAGTTGCAGGATGCTTTGCCGACATTTCCTGATGCAGAGGCATTTTCATGCATTGAGAAGGAGTTGGGACTCCCACTTGACTCCATTTTTTCGTCCATATCTCCATCTCCAATTGCTGCAGCCAGTTTAGGTCAAGTTTACAAAGCCCAACTAAAGTATTCTGGACAGGTAGTCGCTGTAAAAGTACAAAGACCTGGCATTGAAGAAGCTATTGGACTTGATTTTTACTTACTGAGAGGTCTAGGATTTCTCATAAATAAGTATGTTGACGTAATCTCCAGTGATGTTGTTGCTCTTATTGATGAATTTGCACGCAGAGTTTATCAAGAGCTCAACTATGTCCAGGAAGGTCAGAATGCAAGGCGGTTTAAGAAGTTGTATGCTGACAAGCAAGATGTTCTCGTCCCAGATATCTTTTGGGATTACACCAGTGGCAAAGTATTGACCATGGAATGGGTTGATGGAGTCAAATTGAATGAGCAAGCTGCCATTGAGAGACAAGGGCTGAAGGTCTTGGATCTGGTGAACACAGGCATACAGTGCAGCCTTAGACAGCTACTTGAGTATGGATACTTTCATGCAGATCCTCATCCTGGTAATCTCTTGGCAACACCTGAGGGAAAGCTTGCTTTTCTTGATTTCGGAATGATGAGTGAGACACCTGAAGAAGCAAGATTTGCAATAATTGGTCATGTTGTTCACATGGTTAATCGGGATTATGAAGCTATGGCTCGTGACTATTATGCCCTAGACTTTTTGTCACCTGATGTGGATGTTTCTCCAATTGTACCGGCACTTCAGAACTTCTTTGATGGTGCTCTTAATTCAACAGTGAGCGAACTGAACTTTAAAACCATAGTGGATGGGCTGGGTGCTGTCTTATATCAATATCCATTTAATGTCCCGGCATATTATGCATTAATATTGAGGTCGCTTACTGTACTAGAAGGCTTAGCACTTTATGCTGATCCTAATTTCAAGGTGCTGGCTGCATCATATCCATATTTTGCTAAAAGACTACTCACGGATCCCAATCCATATCTCAGAGATGCTCTTATTGAATTGCTTTTTAAGGATGGGAGGTTCAGATGGAATAGACTTGAAAACCTACTTGTTCAGGGAAGAAAAGATAGAGATTTCTCTGCAAAAGATGCTTTACAACCAGTTCTGAAATTATTACTGGCTCCAGATGGTGAACAGCTCAGAATTTTAGTTATTAAAGAGGCTGTCCGTGTTACTGAGGCTGTTATTCTAGGCACAGTGATTGATACATACAACTCTATCCCCAATCCTATGAGGACTCTAATTGTTAGTGGCAACACTGCTGGACCTCTTATGATGAGTGATACTGAACAGGAAAACATGATAAAGCTTAGAGACCAAGTCTTTAGGATATGGAGACTTCTGCGATCCTCAGAGAATTTTGATCCAGCCCTCTTGCAGCCCATTGTACAGGTCCTTCAAGAACCTGACGCACGCAGTTTTGGGGGCCGCGTTATTGGTGGGATAACCCAACGGTTTGCAGCGCGACTATTGCAGCAAGTTCTCCGAGCACCACCAACGGTTCCTGCTTCAACTTTATAG 2166 0.4501 MSILPPGPLQSQCQDQSNNAISSWVYQWSSPPPWCGSRAIRISRPKGACKRRQAVISQAASVEALPALADGRGSTAIQVLRGARDRANDMQAEAKAMARAANASVYTPELVSNKYRSRPIKVLRRTMEILIGVGSFALKLVLDQSNGQLDQNKRIRAVDLRKICTKLGPTFVKIGQGLSTRPDLCPPEYLEELSQLQDALPTFPDAEAFSCIEKELGLPLDSIFSSISPSPIAAASLGQVYKAQLKYSGQVVAVKVQRPGIEEAIGLDFYLLRGLGFLINKYVDVISSDVVALIDEFARRVYQELNYVQEGQNARRFKKLYADKQDVLVPDIFWDYTSGKVLTMEWVDGVKLNEQAAIERQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVSPIVPALQNFFDGALNSTVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGRFRWNRLENLLVQGRKDRDFSAKDALQPVLKLLLAPDGEQLRILVIKEAVRVTEAVILGTVIDTYNSIPNPMRTLIVSGNTAGPLMMSDTEQENMIKLRDQVFRIWRLLRSSENFDPALLQPIVQVLQEPDARSFGGRVIGGITQRFAARLLQQVLRAPPTVPASTL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1317 721 Gene3D Transferase(Phosphotransferase) domain 1 228 429 - -
Vvi3g1317 721 SUPERFAMILY Protein kinase-like (PK-like) 197 433 IPR011009 -
Vvi3g1317 721 Pfam ABC1 atypical kinase-like domain 195 439 IPR004147 -
Vvi3g1317 721 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 71 708 - -
Vvi3g1317 721 CDD ABC1_ADCK3-like 195 439 - -
Vvi3g1317 721 Coils Coil 80 100 - -
Vvi3g1317 721 ProSiteProfiles Protein kinase domain profile. 226 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1317 Vvi-Chr3 19194826 19201508 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1317 K08869 - vvi:100253506 1402.5