Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1314 ATGCCCACGGCTACTCTCTCCTCCTCCTCATTGACTCTCTTCCCCCTCTCTTCTTCTCCAACGCCACCCAGAATTCCTTGTACGAGTACAACCCTAACATTTCCTTCTTTCCTCGTAAAACCCACTTCTGTAAGGATGATGGGCAGAGGTAGTCATATCTTGCCACCCAAGGCTGTGGCAATTGAGAAAGAGACTCCCGAGAACGAACGCCCCTCCACATTTCTCAGAGAATCAGATGGTGATAACCACTCACTATCGTCTGTTCGGGGCCGATTCGAGAAGATGATAAGGGACGCCCAGGACTGCGTGTGCCAAGCAATAGAGGCCGCGGACGGAGGCGGAAAGTTCAAGGAGGACGTGTGGTCGAGACCTGGTGGCGGCGGCGGCATCAGCCGAGTCTTGCAGGACGGTGCTGTTTGGGAGAAGGCCGGCGTTAATGTTTCCGTTGTTTACGGTGTTATGCCTCCTGAAGCCTATAGAGCTGCCAAGCCTGCTTCCAGCACTGACTCCTCCTCTGATCTCAACCACAAGCCTGGACCTGTTCCATTTTTTGCTGCCGGGATTAGCTCGGTTTTACATCCAAAGAACCCATTTGCACCCACACTGCATTTTAATTATCGGTATTTTGAGACTGATGCTCCGAAAGATACTCCTGGAGCACCTAGACAGTGGTGGTTTGGTGGTGGTACTGATTTAACCCCTGCTTACATCTTTGAGGAGGACGTCAAGCACTTCCATTCGGTTCAAAAAAGTGCTTGTGACAAATTCGATCCTAGCTTCTATCCCCGATTCAAGAAATGGTGTGATGATTATTTTTATATTAAGCATCGAGGTGAGAGGCGTGGACTTGGAGGAATATTTTTTGACGATCTTAATGACTATGACCAGGAGATGCTTCTTTCTTTCGCCACTGAATGTGCTAATTCTGTGGTCCCAGCATACTTACCCATTATAGAGAAAAGGAAGGACGTGCCATTTACAGATCGCCACAAGGCATGGCAGCAGTTGCGCAGAGGCCGCTATGTAGAATTCAACTTGGTTTATGATCGGGGTACAACATTTGGACTGAAGACAGGAGGTCGAATTGAGAGCATTCTTGTTTCTCTCCCACTAACTGCACGGTGGGAATATGACCATCAACCAGAAGAGGGGAGTGAAGAATGGAAACTATTGGATGCTTGTATCAACCCAAAGGAATGGATCTAA 1206 0.4859 MPTATLSSSSLTLFPLSSSPTPPRIPCTSTTLTFPSFLVKPTSVRMMGRGSHILPPKAVAIEKETPENERPSTFLRESDGDNHSLSSVRGRFEKMIRDAQDCVCQAIEAADGGGKFKEDVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPEAYRAAKPASSTDSSSDLNHKPGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKSACDKFDPSFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATECANSVVPAYLPIIEKRKDVPFTDRHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHQPEEGSEEWKLLDACINPKEWI* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1314 401 PRINTS Coprogen oxidase signature 185 209 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PRINTS Coprogen oxidase signature 224 246 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PRINTS Coprogen oxidase signature 114 130 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PRINTS Coprogen oxidase signature 361 387 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PRINTS Coprogen oxidase signature 333 360 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PRINTS Coprogen oxidase signature 131 152 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PRINTS Coprogen oxidase signature 261 290 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 Gene3D Coproporphyrinogen III oxidase, aerobic 57 401 IPR036406 GO:0004109|GO:0006779
Vvi3g1314 401 ProSitePatterns Coproporphyrinogen III oxidase signature. 265 289 IPR018375 GO:0004109|GO:0006779
Vvi3g1314 401 FunFam oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 56 401 - -
Vvi3g1314 401 MobiDBLite consensus disorder prediction 1 22 - -
Vvi3g1314 401 PIRSF Coproporphyri_ox 45 401 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 MobiDBLite consensus disorder prediction 63 83 - -
Vvi3g1314 401 Pfam Coproporphyrinogen III oxidase 92 400 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 PANTHER COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL 60 401 IPR001260 GO:0004109|GO:0006779
Vvi3g1314 401 SUPERFAMILY Coproporphyrinogen III oxidase 85 401 IPR036406 GO:0004109|GO:0006779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1314 K00228 - vvi:100243271 823.542