Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1303 ATGGACTTTGACGATGTCGTTTCTGTTATCCATGACGATGAGGAGCTTCAACCTGGACAACCCTATTTCGCGCTGCCATTGGGCAAGTTGAAGCAACCGCTTCAGGCGGAGGAGATGGCCGCTTTGGCTGTCAAGGCGAGGTCCGCCCTCATGAGGAGTGGCGGAGACCAATGCCAGTGTCGCCAAAAGTCTCCATTGCCGGCCATGTTTTCTGGCGAGAAGGACTCGAAGTCGTCCGGGAGAGTAGCTCCCGGCGGTGGTGTCGAAGGCGGAGGAGGCAGTGAGACGGAGGAGTACGTGGATGCGCCGTGA 312 0.5833 MDFDDVVSVIHDDEELQPGQPYFALPLGKLKQPLQAEEMAALAVKARSALMRSGGDQCQCRQKSPLPAMFSGEKDSKSSGRVAPGGGVEGGGGSETEEYVDAP* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1303 103 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 3 79 - -
Vvi3g1303 103 Pfam PADRE domain 5 77 IPR025322 -
Vvi3g1303 103 MobiDBLite consensus disorder prediction 55 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1303 Vvi-Chr3 18978290 18978601 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1303 - - vvi:109122328 202.601