Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1295 ATGATGAAGAAAATAGAGCTTATTTTTGTCTCTGTCTCAGCTATAGGACATATTGTATCAACTGTGGAGTTTGCCAAGCTTCTTGTTGGTAGAGATGACCGCTTCTCAGTCACTCTGCTCATCATGAAGCTACCTTTTGAGGACTCTGCGGTAACCAACTATATCCATTCAGTTTCTGCTTCCGTTTCCGGGTCCATTCGATTTGTCCACCTTCCTGAACTCGACTCAGATTCATCATCGTCATCCACTAATATCTTATTCTCTAATATCATTGAAAGGCAGAAGCCTCTGGTGAGGGATGCAATCCACCAGCTCACTCGGTCTGAGTCGGGTCGACTCGCTGGGATTGTGGTCGATTTGCTTTGCACTTCCATGATAGATGTAGCTAATGAATTGGGTGCTCCTTCCTATGTGTACTTCGCCTCCAGTGCGGCCTGCCTTGCTCTCATGTTTCATCTTCAAACCCTCAAGGACCACCAGGGCTTGGATGTTACTGAGTTTGCTAACTCGGATGCTGAGTTGGTGGTCCCGGGTTTTGTCAACTCGGTTCCAGCTCGAGTCTTGCCTGCTGTGGCGGTGGACAAGGAGGGTGGCGGATCCATGGATTTCCTCGACCGGGCAAGGGGCTTTAGAGACGCCAAGGGTATTTTGGTAAATACGTTTTTGGAGCTAGAATCTCATGTGATTAACTCCTTTGTCGATGGTACAACTCCTCCCATTTACACGGTAGGGCCGTTATTGAACTTGCAACATGCCAACAAACAAAAACAAGATAGTGACTTGGATGTCATCCGATGGCTTGATGATCAGCCCACATCATCTGTGGTGTTTTTATGTTTTGGCAGCGCTGGAGCATTCCACATGGATCAAATCAAGGAGATTGCAATTGGCTTGAGAATAGTGGGCATCGTTTCTTGTGGACACTCCGAAGACCTCCACTAA 942 0.4713 MMKKIELIFVSVSAIGHIVSTVEFAKLLVGRDDRFSVTLLIMKLPFEDSAVTNYIHSVSASVSGSIRFVHLPELDSDSSSSSTNILFSNIIERQKPLVRDAIHQLTRSESGRLAGIVVDLLCTSMIDVANELGAPSYVYFASSAACLALMFHLQTLKDHQGLDVTEFANSDAELVVPGFVNSVPARVLPAVAVDKEGGGSMDFLDRARGFRDAKGILVNTFLELESHVINSFVDGTTPPIYTVGPLLNLQHANKQKQDSDLDVIRWLDDQPTSSVVFLCFGSAGAFHMDQIKEIAIGLRIVGIVSCGHSEDLH* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1295 313 Gene3D Glycogen Phosphorylase B; 1 266 - -
Vvi3g1295 313 FunFam Glycosyltransferase 8 258 - -
Vvi3g1295 313 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 299 - -
Vvi3g1295 313 Gene3D Glycogen Phosphorylase B; 267 305 - -
Vvi3g1295 313 PANTHER GLYCOSYLTRANSFERASE 7 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1295 Vvi-Chr3 18895490 18896431 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1295 4 302 Glycosyltransferase AT3G21750 39.286 2.14e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1295 - - vvi:100244985 553.132