Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1291 ATGTGGCCTAATAAGAGTGCACCACACAGTAAAAGAATAAGTCAACTGAGAATCTTGCCTGCTGTGGCGGTGGACAAGGAGGGTGGCGGATCCATGGATTTCCTCGACCTGGCAAGGGGCTTTAGAGAGGCCAAGGGTATTTTGGTAAATACGTTTGTGGAGCTAGAATCTCATGTGATTAACTCCTTTGTCGATGGTACAACTCCTCCCATTTACAAAGTAGGGCCATTATTGAACTTACAACATGCCAACAACCAAAAACCAGATAGTGACTTGGACGTCATCCGATGGCTTGATGATCAGCCCACATCATCTGTGGTGTTTTTATGTTTTGGTAGCGCTGGAGCATTCCACATGGATCAAATCAACGAGATTGCAATTGGGCTCGAGAATAGTGGGCATCGTTTCTTGTGGACACTCCGACGACCTCCACCAAAAGATAAGATGGCAATATCTAGTGATTATGTAAATTTCGAGGAAGTATTACCTGAAGGGTTCTTAGATCGTACATCTAAAATTGGGAAGATAATTGGATGGGCACCACAAACGGCTATTTTAGCTCACTCTGCAGTAGGAGGGTTTATATCTCATTGTGGGTGGAATTCTACATTAGAAAGCATATGGTATGGTGTCCCAGTAGCCACATGGCCTATGTATGCAGAACAACAATTGAATGCGTTTCAAATAGTTAGAGAGTTAGAAATGGGGGTAGAGATTAGATTTGATTATAACATGGATACTAGTAATCTTGTAAGTGCTCAAGAAATTGAGAGTAGAATAAGAAGTCTAATGGATGATAGCAGCAACATTAGAATGAAAAGGACAAAAATGAAAGAGAAGTGCATGAAGGCCTTGACAGAAGGTGGATCTTCAGACTGTAGCATACAACGTCTAATTGGAGACATCATAACTAATATCTCATGA 924 0.4156 MWPNKSAPHSKRISQLRILPAVAVDKEGGGSMDFLDLARGFREAKGILVNTFVELESHVINSFVDGTTPPIYKVGPLLNLQHANNQKPDSDLDVIRWLDDQPTSSVVFLCFGSAGAFHMDQINEIAIGLENSGHRFLWTLRRPPPKDKMAISSDYVNFEEVLPEGFLDRTSKIGKIIGWAPQTAILAHSAVGGFISHCGWNSTLESIWYGVPVATWPMYAEQQLNAFQIVRELEMGVEIRFDYNMDTSNLVSAQEIESRIRSLMDDSSNIRMKRTKMKEKCMKALTEGGSSDCSIQRLIGDIITNIS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1291 307 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 83 253 IPR002213 GO:0008194
Vvi3g1291 307 Gene3D Glycogen Phosphorylase B; 11 295 - -
Vvi3g1291 307 PANTHER GLYCOSYLTRANSFERASE 17 301 - -
Vvi3g1291 307 CDD GT1_Gtf-like 32 287 IPR002213 GO:0008194
Vvi3g1291 307 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 17 303 - -
Vvi3g1291 307 ProSitePatterns UDP-glycosyltransferases signature. 179 222 IPR035595 -
Vvi3g1291 307 Gene3D Glycogen Phosphorylase B; 85 283 - -
Vvi3g1291 307 FunFam Glycosyltransferase 85 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1291 Vvi-Chr3 18793856 18805971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1291 7 307 Glycosyltransferase AT3G21760 50.649 9.66e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1291 - - vvi:100267294 589.341