Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1290 ATGGATCAAATCAAAGAAATTGCAATTGGGCTTGAGAATAGTGGGCATCGTTTCTTGTGGACGCTCCGACGACCTCCACCAAAAGGTAAGATCGCAATGCCTACTGATTATGTGAATTTCGAGGAAGTACTACCTGAAGGGTTCTTAGATCGTACATCTAAAATTGGAAAGATAATTGGATGGGCACCACAAACGGCTATTTTAGCTCACTCTGCAATAGGAGGGTTTGTATCTCATTGTGGGTGGAATTCTACATTAGAGAGCATATGGTATGGCGTCCCGGTAGCTACATGGCCTATGTATGCAGAACAACAATTGAATGCGTTTCAAATAGTAAAAGAGTTAGAAATAGGGGTAGAGATCAGATTAGATTATAAAAAGGATACTAGTGATATTGTAAATGCTCAAGAAATTGAGAGTAGAATAAGAAGTTTGATGGAGGATAGCAATGACATAAAAACAAATAGGGCAAAGATGAAAGAAAAGTGCGTGACAGCCCTAACGGAAGGTGGATCTTTAGATTCTAGCTTACAACGTCTAATTGGAGACATGATAACTAATATCTCATGA 570 0.3895 MDQIKEIAIGLENSGHRFLWTLRRPPPKGKIAMPTDYVNFEEVLPEGFLDRTSKIGKIIGWAPQTAILAHSAIGGFVSHCGWNSTLESIWYGVPVATWPMYAEQQLNAFQIVKELEIGVEIRLDYKKDTSDIVNAQEIESRIRSLMEDSNDIKTNRAKMKEKCVTALTEGGSLDSSLQRLIGDMITNIS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1290 189 CDD GT1_Gtf-like 2 162 IPR002213 GO:0008194
Vvi3g1290 189 PANTHER GLYCOSYLTRANSFERASE 2 185 - -
Vvi3g1290 189 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 185 - -
Vvi3g1290 189 Gene3D Glycogen Phosphorylase B; 2 168 - -
Vvi3g1290 189 FunFam Glycosyltransferase 1 165 - -
Vvi3g1290 189 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 3 135 IPR002213 GO:0008194
Vvi3g1290 189 ProSitePatterns UDP-glycosyltransferases signature. 61 104 IPR035595 -
Vvi3g1290 189 Coils Coil 135 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1290 Vvi-Chr3 18789615 18790184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1290 3 189 Glycosyltransferase AT3G21760 57.592 7.73e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1290 - - vvi:100262128 383.259