Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1288 ATGTCAAATGCAAACTATCTCAAGAACTCCTGGGCCAAATCATCCCAAGTCCGACGACATGATACATCCAATGAAGCAAACCAACGTTGTGTCGCACCACTCAAGTACATAGGGAAAAACATAACCATCTGGGCCTCAACCAATCCATGGGCCCTTATAACTATGAGGGTTAAAGATCTGTTAGTGCAGCAAGGTATGGTGAAGGCGTTATACGGAAAGCAACCAGAAGGAATGAATGACATGGATTGGAAGGATTTGGAAGCGAATGTTGCGGCAACAATCAGGCTTTGTTTGGTTGATGACGTGATGTACCATGTCATGGATGAGGAGTCACTGACGGCAATCTGGTTGAAATTGGAAAGTCGATATATGTCGAAGTCGTTGATGAAGAAGTTGTATCTTAAGCAAAAACTGTATGGTCTTAAGATGGCAGAGGGCACAAATCTAAGCCAACATATCAACGTGTTCAATTAG 474 0.4304 MSNANYLKNSWAKSSQVRRHDTSNEANQRCVAPLKYIGKNITIWASTNPWALITMRVKDLLVQQGMVKALYGKQPEGMNDMDWKDLEANVAATIRLCLVDDVMYHVMDEESLTAIWLKLESRYMSKSLMKKLYLKQKLYGLKMAEGTNLSQHINVFN* 158
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1288 157 Pfam gag-polypeptide of LTR copia-type 83 156 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g1288 Vvi-Chr3 18709189 18712186 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1288 - K11108 ats:109769843 93.9745