Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1287 ATGTCTGCTGATCATTTGCAGTTCTTGAAGAACAAGTTCATTCTGGACTTGGAAGACGCGGAGGAGGAACACTCCGGGGAAAATGAGATCCCCCTTCTCGCTCATTTTCTACAGATTAGAGATGTCTTGAAAGCAAAGGACATCACGGCATCTACACCCATCAGATTGAAGAATTGTCTATACAACGCCATCAGCGCATTAGAAGAGTGCGTGGTGTTGTCGGAGAAGCGTGAGCCCCGAAAGAAGAAGGATGGTCCGATGCATGGATATACTCTGGCGGAGCATTGGCTTTTATGCAAAACCAGAAGGTTGTTGGTTCAAATATCGAGAAGGCTAACTGCTACAGCTGATGCGGTTATTCCTGGTATGACCGACATGGCCGTAAGTTCATCCTCCGCCTCCTTACCACTTATTCCAAGACCAAACCCTGAGAATTTTTATCCCAACCATTTTCGAAGTTTTTATGGACAAAGAAATGAAATTATTGATCGACTTGATTTTGGGAAAGGATTTCAGGAAATTGGAATCGTGGGGATTGGGGGCTCGGGTAAAACCACTCTGGCCCAATTGGTTTTTACTAAAATCGATGGGTATCTACGGGATAACAGAATTTGGATCTGCTTATTCCCGAAACTGAGTGGAGATGTGGACTTCAAGGAGATGATAAAAGACATGTTGAAGCAGTGCGGGGCAGCATCTCGGGAAGTAGAAGTAGAAGAGCTGTTGGAGAATCTTGGGAAAGCTTTGAAGGGTAAAAGGTATTTGATGGTGTTGGACGGCATCTGGGACATCAACATCCACTGGTATTTCAAGTTAAAGGAAAAGTTGAAGTCTGTAAGGGGTGATGGGCATGTCATCATCACCAGCCGACTACCCCACAAAGCAAGAATGATGGTGGGCCCTCACAATCTGTATCACATACAGCCTCCCATGGGCCACATGGCGCGATTCGAAGAAATATTGGGTAGGCTTGAAAGGTATAAGTTGAAATTGAAGGATGAGGCTGCAGAGCAATGTGATGGCCTCCCATTAGCAATGCACACATTGGCACCAGTGATTGAAGACCGGATCCTGGGAAAAGTCGACCCGATCATGGGATATAGGAATTTACTTTTTAGTGGAACTGATCAGATGGTGTTGGTCAACCTTGAAGATGATGCTATATTGGGAAATGAGCTTTTGTTATCATGGCGTGGCACCTCATATAATGAAGAATGGGTTTGGTTTTAA 1230 0.4488 MSADHLQFLKNKFILDLEDAEEEHSGENEIPLLAHFLQIRDVLKAKDITASTPIRLKNCLYNAISALEECVVLSEKREPRKKKDGPMHGYTLAEHWLLCKTRRLLVQISRRLTATADAVIPGMTDMAVSSSSASLPLIPRPNPENFYPNHFRSFYGQRNEIIDRLDFGKGFQEIGIVGIGGSGKTTLAQLVFTKIDGYLRDNRIWICLFPKLSGDVDFKEMIKDMLKQCGAASREVEVEELLENLGKALKGKRYLMVLDGIWDINIHWYFKLKEKLKSVRGDGHVIITSRLPHKARMMVGPHNLYHIQPPMGHMARFEEILGRLERYKLKLKDEAAEQCDGLPLAMHTLAPVIEDRILGKVDPIMGYRNLLFSGTDQMVLVNLEDDAILGNELLLSWRGTSYNEEWVWF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1287 409 Gene3D - 142 307 IPR027417 -
Vvi3g1287 409 Pfam NB-ARC domain 159 353 IPR002182 GO:0043531
Vvi3g1287 409 PRINTS Disease resistance protein signature 248 262 - -
Vvi3g1287 409 PRINTS Disease resistance protein signature 173 188 - -
Vvi3g1287 409 PRINTS Disease resistance protein signature 339 353 - -
Vvi3g1287 409 PANTHER DISEASE RESISTANCE PROTEIN RP 132 350 IPR044974 GO:0006952
Vvi3g1287 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 355 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1287 Vvi-Chr3 18674066 18676918 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1287 - - vvi:104878933 813.913