Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1276 ATGGAGTTAGAATCTCATGTGATCAACTCCTTTGCGAACGGTACAACTCCCCCAGTGTACACAGTGGGACCCTTATTGAACTTAAATCATGGGGACCACCACAAACAAGATAGTGCCTCAGATGTCATTAGATGGCTTGATGATCAGCCTCAATCATCAGTGGTGTTCTTATGTTTTGGTAGTGTTGGAGCATTCAACGATGATCAAATAAAAAATATTGCAAGTGGGCTTGAAAATAGTGGATATCGTTTCCTGTGGTCTCTTCGTCGATCTCCACCAAAAGGTATGATCCCAGACTCTAGTGATAACACAAATTTTGAGGAAGTTTTATCAAAAGAGTTCTTAAATCGTACATCTGAGATCGGAAAGATAATTGGATGGGCACCACAAATGGAAGTTCTAGCCCACTCTGCAATAGGAGGGTTTATTTCTCACTGTGGATGGAATTCTACGCTAGAGAGCATATGGCATGGTGTACCAATAGCTACCTGGCCAATATATGCGGAACAACAATTGAATGCCTTTCAAATAATAACAGAGTTAGAAATGGGGGTGGAGATCAAAATAGATTATAATAAGGATAGGAATAATATTGATCTTATAAATTCTCAAGAGATTGAGAGTAGAATAAGAAGTTTGATGGATGATAGTAACCCCATTAGAAAGAAGCTGGCATCTATGAAAGAAAATTGCAGGAAGGCCTTGATGGAAGGTGGATCTTCGAACTCTAGCATACAACGTCTAATTGGAGACATGATAACCAATTTCTCATGA 774 0.3928 MELESHVINSFANGTTPPVYTVGPLLNLNHGDHHKQDSASDVIRWLDDQPQSSVVFLCFGSVGAFNDDQIKNIASGLENSGYRFLWSLRRSPPKGMIPDSSDNTNFEEVLSKEFLNRTSEIGKIIGWAPQMEVLAHSAIGGFISHCGWNSTLESIWHGVPIATWPIYAEQQLNAFQIITELEMGVEIKIDYNKDRNNIDLINSQEIESRIRSLMDDSNPIRKKLASMKENCRKALMEGGSSNSSIQRLIGDMITNFS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1276 257 PANTHER GLYCOSYLTRANSFERASE 2 252 - -
Vvi3g1276 257 ProSitePatterns UDP-glycosyltransferases signature. 127 170 IPR035595 -
Vvi3g1276 257 CDD GT1_Gtf-like 1 248 IPR002213 GO:0008194
Vvi3g1276 257 Gene3D Glycogen Phosphorylase B; 33 233 - -
Vvi3g1276 257 Gene3D Glycogen Phosphorylase B; 2 245 - -
Vvi3g1276 257 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 44 180 IPR002213 GO:0008194
Vvi3g1276 257 FunFam Glycosyltransferase 33 233 - -
Vvi3g1276 257 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1276 Vvi-Chr3 18523782 18524555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1276 2 257 Glycosyltransferase AT3G21760 50.958 2.09e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1276 - - vvi:100251889 524.628