Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1274 ATGAAGAAGGCAGAGCTGGTCTTCATCCCTGCCCCGGCCATAGGCCACCTTGTGTCGGCTGTGGAGTTTGCCAAGCTCCTAGTTGATCGAGATGACCGCTTCTCAGTCACTCTGCTCATCATGAAGCTACCAGCTGAGCTTCCTATGCTCACAGACTACGTACAGTCTCTTTCTGCTTCCATTTCTAGACCTGCCTACTTCTTCTATACCTGCATGGAAAACCAGAAACCGCTTGTGAGAGATGCAGTGAAGCAACTCCCTCGGACCGAGTCCATTCAACTTGCAGGGTTTGTGGTTGATATGCTTTGCTTGTCCATGATTGATGTGGGAAATGAATTTGGTTTTCCTTCGTATATCTTCTTCCCCTCTGGTGCAGCCTTTCTTCGTCTCATGCTCCATTTTCAAGCCCTCCATGACCATCAGGCTATGGATATTACTGAGTTCGGTGACTCGGATGCTGACTTGTTGGTACCAAGTTTCGCCAACTCAGTTCCTGCTCGAGTTTTGCCTTTTATGGTGGTTGACAAGGAGGGTGCATCCACTGTATTCCTCAACCGCACGCGAAGGTTTAGAGAAATGAAGGGTATTTTGGCCAATACGTTTATGGAGTTGGAATCACATGCTATTAACACCATTGCTAATGGTACAACTCCTCTTGTATACCCAGTGGGACCTATGTTGAACCTAAAGCTTGGAGACAATCATAATCATATTAGCTTTGATTTGGATCATATGATGAAGTGGCTTCATGATCAACCCCCGTCATCTGTCGTATTCCTATGCTTCGGCAGCATTGGAAGCTTTTGTGTAGAGCAAGTTAAAGAGATAGCACATGGGCTTGAGCACAGTGGGTTTCGCTTTTTGTGGAGCCTTCGTCAGCCTCCGCCAAAAGGTAAGATAGCATTACCTAGCGACTATGCTAATCCCGAGGAAGTTCTTCCTAAAGGGTTCCTAGATTGA 960 0.4667 MKKAELVFIPAPAIGHLVSAVEFAKLLVDRDDRFSVTLLIMKLPAELPMLTDYVQSLSASISRPAYFFYTCMENQKPLVRDAVKQLPRTESIQLAGFVVDMLCLSMIDVGNEFGFPSYIFFPSGAAFLRLMLHFQALHDHQAMDITEFGDSDADLLVPSFANSVPARVLPFMVVDKEGASTVFLNRTRRFREMKGILANTFMELESHAINTIANGTTPLVYPVGPMLNLKLGDNHNHISFDLDHMMKWLHDQPPSSVVFLCFGSIGSFCVEQVKEIAHGLEHSGFRFLWSLRQPPPKGKIALPSDYANPEEVLPKGFLD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1274 319 Gene3D Glycogen Phosphorylase B; 1 248 - -
Vvi3g1274 319 Gene3D Glycogen Phosphorylase B; 249 319 - -
Vvi3g1274 319 PANTHER GLYCOSYLTRANSFERASE 5 318 - -
Vvi3g1274 319 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1274 Vvi-Chr3 18479253 18480290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1274 3 319 Glycosyltransferase AT3G21780 45.317 2.69e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1274 - - vvi:100262128 409.453