Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1268 ATGTCCACCCCTACAGACTGGGTTCAATTCTACCCCAATTCTAGCCACTTGGCACCTCCTGGCCGTGCCACGTCATCCACCCAGTCCCCCGACGCCGCCGTCGGCACCACTTCTTCTTCCCCCCCTGCTGGGGCAGCGGCTGGCGCCGCTGCTACTCATGGTGGTGGTGCTCACCTGACGCCGGAGGGCCGGGTGGCAAAGCCCATCAGGCGGCGGTCCAGGGCGTCCCGGCGCACCCCGACAACCCTGCTCAACACGGACACGTCCAACTTCCGAGCCATGGTTCAGCAGTTCACCGGCGGCCCCAGTGCGCCCTTTGCAGGAGGCAACCAGCACCACCACGGCGCTATGCCGGGGTTCGCTTTCGGCCAGAGGGTTAACCCCAGCACTGCCGTCATGGTGCAGCCGTCCATGTACCATCTACAGTATCACCATCAACCGCAGCAGCAGCCGCAACAGCCGCAGTATCAGCATCAAAACTACATGTTTACATTGAATAATTCCAGCAATACTAATAACAATACTGCCGTAGCTTCCGGTGGAGGAGGCGGCGCAGGTGGCGGAGATATGTTTTTTCAGAGGCTGAGCAGCTCAAGAGCTCCAATCATGGAGGTTTCAAACGGATTCATGTTTTGA 636 0.5959 MSTPTDWVQFYPNSSHLAPPGRATSSTQSPDAAVGTTSSSPPAGAAAGAAATHGGGAHLTPEGRVAKPIRRRSRASRRTPTTLLNTDTSNFRAMVQQFTGGPSAPFAGGNQHHHGAMPGFAFGQRVNPSTAVMVQPSMYHLQYHHQPQQQPQQPQYQHQNYMFTLNNSSNTNNNTAVASGGGGGAGGGDMFFQRLSSSRAPIMEVSNGFMF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1268 211 PANTHER VQ MOTIF-CONTAINING PROTEIN 10 195 IPR039609 -
Vvi3g1268 211 MobiDBLite consensus disorder prediction 1 43 - -
Vvi3g1268 211 MobiDBLite consensus disorder prediction 1 83 - -
Vvi3g1268 211 Pfam VQ motif 78 105 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1268 Vvi-Chr3 18402528 18403499 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1268 - - vvi:100241630 325.865