Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1258 ATGTCGGCTGATCATTTGCAGTTCTTGAAGAACAAGTTCATTCTGGACTTGGAAGACGCAGAGGAGGAACACACGGGGGAAAATGAGATCCCCCTTCGCTCTCATTTTCTACAGATTAGAGATGTGTTGAAAGCAAAGGACATCACGGCATCCACACCCATAAGATTGAAGAATTGTCTATACAACGCCATCAGCGCATTAGAAGAGTGCGTGGTGTTGTCGGAGAAGCGTGAACCCCGAAGAAGGAGGGTCCGATGCAAGGATACACTCTGGCCGAGCTGTGGCTTATATGCAAAACCAGATAAACTGAGTGGAGATGTGGAGTTTAAGGAGATGATAAAAGACATGTTGAAACAATGTAAGGCAGCAGCAGTGGTGGACTCTGGTGTAGAAGTAGGAGTAGAAGAGCTGTTGGAGATTCTGGGGAAAGCTTTGAAGGGTAAAAGGTATTTGATGGTGTTGGACGGCATCTGGGACATCAACATCGACTGGTATTTCAAGTTAAAGGAAAAGTTGAAGTCCTTAAGTGGTGATGGTGATGGTGATGGTGATGGTTATGGGCATGTCATCATCACAAGCCGACTCCCCCACAAAGCAAGAATGATGGTGGGCCCTCACAATTTGTATCAGATGCAACCTCCATCATCCATGGAGCAAGCATGGCGATTCAAGTATGGAAGCTTATTGGAATACCTGAAAGAATATAGGTTGAAAATGAAGGACGAGGTTCTAGAGCATTGCGATGGCCTCCCATTAGCAATGCACACATTGGCGGAGGTGATTCACAAGCAGATCCTGGGAACAGAGTACAATTGGAAAAGATTTGTTGGGATAACATTGATCAATTGCGAAGATGATGCAAGGTTGGGAAATGAGTTGTTGTTATCATGTTGTAGCATCTCATACAAGGATTATATAGTTTGGAGTGGGGATGCAATGGCTAATCAACTCATGCAATTAATCACACAAGCAGTCAGAAATGCGAAACCTGATTCAAATCCATCAATTCTCCTATTGCCTTTGGGATCTAAAGCTAATATTTCGTTTTCACTTGGATGGGAGAATCAACCACCTACAACATTACCTAAGGATATGCTTCAGTTTTTACGAGAGGTGATCACTAAACCAGAAAAGGATATAGACAGGTAA 1149 0.4352 MSADHLQFLKNKFILDLEDAEEEHTGENEIPLRSHFLQIRDVLKAKDITASTPIRLKNCLYNAISALEECVVLSEKREPRRRRVRCKDTLWPSCGLYAKPDKLSGDVEFKEMIKDMLKQCKAAAVVDSGVEVGVEELLEILGKALKGKRYLMVLDGIWDINIDWYFKLKEKLKSLSGDGDGDGDGYGHVIITSRLPHKARMMVGPHNLYQMQPPSSMEQAWRFKYGSLLEYLKEYRLKMKDEVLEHCDGLPLAMHTLAEVIHKQILGTEYNWKRFVGITLINCEDDARLGNELLLSCCSISYKDYIVWSGDAMANQLMQLITQAVRNAKPDSNPSILLLPLGSKANISFSLGWENQPPTTLPKDMLQFLREVITKPEKDIDR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1258 382 PANTHER DISEASE RESISTANCE PROTEIN RP 119 302 IPR044974 GO:0006952
Vvi3g1258 382 Gene3D - 86 210 IPR027417 -
Vvi3g1258 382 PRINTS Disease resistance protein signature 247 261 - -
Vvi3g1258 382 PRINTS Disease resistance protein signature 144 158 - -
Vvi3g1258 382 Pfam NB-ARC domain 111 275 IPR002182 GO:0043531
Vvi3g1258 382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1258 Vvi-Chr3 18084538 18087084 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1258 - - vvi:104878962 520.005