Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1257 ATGTCTGCTGATCATTTGCAGTTCTTGAAGAACAAGTTCATTCTGGACTTGGAAGACGCGGAGGAGGAACACAGCGGGGAAAATGAGATCCCCCTTCTCGCTCATTTTCTACAGATTAGAGATGTGCTGAAAGCAAAGGACATCACGGCATCCACACCCATCAGATTGAAGAATTGCCTATACAACGCCATCAGCGCATTAGAAGAGTGCGTGGTGTTGTCGGAGAAGCGTGAACCCCGAAAGAAGAAGGATGGTCCGATGCATGGATACACTCTGGCGGAGCATTGGCTGATATGCAAAACCAGAAGGTTGTTGGTTCAAACAACGAGAAAGCTAACTGCTACAGCTGATGCGGTTATTCCTGGTATGACAGACATGGCCGCAAGTTCATCCTCCACCTCCTTCCCAGTCATTCCAAGACCAAACTCCCAGAATTTTAATCATCTGAGGGTTGAAGGTTTTTATGACCAATCAAAAACAATTTTCGATCGACTTGGGAAGAGAGGGAAGGGATTTCATGAAATCGGAATCGTGGGGATTGGAGGCTCGGGTAAAACCGCTCTGGCCCAATTGGTGTTTACTCAATCCAATTGGCGGTATTTTGGGGGTTACAGAATTTGGATATGCTTATTCCGGAAACTGAGTGGAGATGTAAAGTTTAAGAAGATGATAAAGGACATGTTGAAGCAGTGTAAGGCAGTGGTGGATGATGAAGATTTTGACGCAGCAGCGGTGGATGATGAAGACTACGATGGGGTAGAAGTAGAAGAGCTGTTGGAGAATCTTGGGAAAGCTTTGAAGGGTAAAAAGTATTTGATGGTGTTGGACGGCATCTGGGACATCAACATCGACTGGTATTTCAAGTTAAAGGACAAGTTGAAATCTCCTCCATCAAGATCCATGGAGCTAATTTGGGAATTCTATGTAATATTGGGTATGCTTGAAAAATATAAGTTGAAATTGAAGGATGAGGTTATAGAGCAATGTGATGGCCTTCCATTAGCAATGCACACTATGGGAGCTGTGATTGGGGACCAGATCCTGGGAGTACGGTAA 1056 0.447 MSADHLQFLKNKFILDLEDAEEEHSGENEIPLLAHFLQIRDVLKAKDITASTPIRLKNCLYNAISALEECVVLSEKREPRKKKDGPMHGYTLAEHWLICKTRRLLVQTTRKLTATADAVIPGMTDMAASSSSTSFPVIPRPNSQNFNHLRVEGFYDQSKTIFDRLGKRGKGFHEIGIVGIGGSGKTALAQLVFTQSNWRYFGGYRIWICLFRKLSGDVKFKKMIKDMLKQCKAVVDDEDFDAAAVDDEDYDGVEVEELLENLGKALKGKKYLMVLDGIWDINIDWYFKLKDKLKSPPSRSMELIWEFYVILGMLEKYKLKLKDEVIEQCDGLPLAMHTMGAVIGDQILGVR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1257 351 PANTHER DISEASE RESISTANCE PROTEIN RP 110 341 IPR044974 GO:0006952
Vvi3g1257 351 PRINTS Disease resistance protein signature 265 279 - -
Vvi3g1257 351 PRINTS Disease resistance protein signature 174 189 - -
Vvi3g1257 351 Gene3D - 141 301 IPR027417 -
Vvi3g1257 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 343 IPR027417 -
Vvi3g1257 351 Pfam NB-ARC domain 161 285 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1257 Vvi-Chr3 18038608 18039771 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1257 - - vvi:104878961 631.328