Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1246 ATGCTAACTACTTTTGATCAATTCTTTGGAAGCTTTCCTAGATGTATAAAGTTATTTGGGGCTAAAGTGAAACATTCTTACATTCAAAGCCAGTCTTTGAGTGCTGCTCATATCAAGTGGACTTCAGTTCAGCAGGGATCTTCTGGTTCCTATGAGCTTATAGAGGTAAGTACTGGTGGAAAATTGAGCAGGCATAATGTCAACATCCAGCAAGTCGGCCCAGATACAGTAACAGAGTTGTCAGCTTTTCACTTGTCTGTTGGTGACCCAACACAAGATCTACATACTAGACTAGTCCTGGACCATCCACGAGGGTACTTCCGGCAACTTCATAAGTGCATTGTGGCTCATTCACTAGGACAAGCTGTATTTGATGGGAATATAAAGGTCAACAGATACGCACAGCAGACAGATGCAGGACAACTGACAAGAAGCCTTCTTCTTGAGCCTCGGGCAACTGTAAATGTCAAACCCAACCTCCAAATCATTGCTGATGATGTCAAGTGTTCCCATGGAGCTGCAATTAGTGACCTGGAAGAAAACCAACTTTTCTACTTCTTGGCGCGTGGTATTGATTTAGAGACTGCTAGAAAGACTCTCATCTTCTCCTTCGGAGATGAGGTTATAGAGCGTTTGCCTTACTCCTCTATCCGGAAGAAAGTAGAGACTCATATCAAAGCACTGTTGGAACCCAAAAGGTTCCTCATGATGAGTAGTAAATGTTTTGCATGCACCAAACAAAAACAGCCCCGGCTGTTCCCTGCATGTATGCAGTTGGATGACGCGATGCTGTTGCATGGCTCATCACTCTTGTACCGTAGGCTTCAAGGGTTTACCTGA 840 0.4405 MLTTFDQFFGSFPRCIKLFGAKVKHSYIQSQSLSAAHIKWTSVQQGSSGSYELIEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKCIVAHSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEENQLFYFLARGIDLETARKTLIFSFGDEVIERLPYSSIRKKVETHIKALLEPKRFLMMSSKCFACTKQKQPRLFPACMQLDDAMLLHGSSLLYRRLQGFT* 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1246 279 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 20 232 IPR011542 GO:0016226
Vvi3g1246 279 Pfam SUF system FeS cluster assembly, SufBD 20 204 IPR000825 GO:0016226
Vvi3g1246 279 SUPERFAMILY Stabilizer of iron transporter SufD 20 230 IPR037284 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g1246 Vvi-Chr3 17891888 17906378 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1246 K09015 - vvi:100260803 405.216