Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1235 ATGTCTGCTGATCATTTGCAGTTCTTGAAGAACAAGTTCATTCTGGACTTGGAAGACGCGGAGGAGGAACACTCCGGGGAAAATGAGATCCCCCTTCTCGCTCATTTTCTACAGATTAGAGATGTGTTGAAAGCAAAGGACATCACGGCATCTACACCCATCAGATTGAAGAATTGTCTATACAACGCCATCAGCGCATTAGAAGAGTGCGTGGTGTTGTCGGAGAAGCGTGAGCCCCGAAAGAAGAAGGATGGTCCGATGCATGGATACACTCTGGCGGAGCATTGGATTTTATGCAAAACCAGAAGGTTGTTGGTTCAAGTAAAGAGAAAGCTTACTGCTCCGGCTGATCCCATTATTCCTGGTATGACCGACATGGCCGCAAGTTCATCCTACACCTCCTTACAAGTTATTCCAAGACCAAACTCTAGGAATTTTGATCCCGACTATTGTCCGGGTTTTGATGAACAAGTAAACACAATTTTAGATCGACTTGAGAATACAGGGGATGGGTTTCAGGAAATCGGAATCGTGGGGATCGGGGGATCGGGTAAAACCACTCTCGCCCAATTGGTTTTTACTAAAATCGATGGGTATCTACGGGATAACAGAATTTGGATCTGCTTATTCCCGAAACTGAGTGGAGATGTGGACTTCAAGAAGATGATAAAAGACATGTTGAAGCAGTGCAGGGCAGCATCTCGGGAAGTAGAAGTAGAAGAGCTGTTGGAGAATCTTGGGAAAGCTTTGAAGGGTAAAAGGTATTTGATGGTGTTGGACGGCGTCTGGGACATCAACATCCACTGGTATTTCAAGTTAAAGGACAAGTTGAAGTCTTTGAGTGGTGATGGTAATGGTGATGGGCATGTCATCATTACAAGCCGACTCCCCCACAAAGCAAGAATGATCGTGGGCCCTCACAATCTGTATCACATACAGCCTCCCATGGGGCACATGTCGCGATTCGAAGGTATATTGGGTAGGCTTGAAAGGTATAAGTTGAAATTGAAGGATGAGGCTGTAGAGCAATGTGATGGCCTCCCATTAGCAATGCACACATTGGCACCAGTGATTGAAGACCAGATCCTGGGAAAAGAGTAA 1101 0.4569 MSADHLQFLKNKFILDLEDAEEEHSGENEIPLLAHFLQIRDVLKAKDITASTPIRLKNCLYNAISALEECVVLSEKREPRKKKDGPMHGYTLAEHWILCKTRRLLVQVKRKLTAPADPIIPGMTDMAASSSYTSLQVIPRPNSRNFDPDYCPGFDEQVNTILDRLENTGDGFQEIGIVGIGGSGKTTLAQLVFTKIDGYLRDNRIWICLFPKLSGDVDFKKMIKDMLKQCRAASREVEVEELLENLGKALKGKRYLMVLDGVWDINIHWYFKLKDKLKSLSGDGNGDGHVIITSRLPHKARMIVGPHNLYHIQPPMGHMSRFEGILGRLERYKLKLKDEAVEQCDGLPLAMHTLAPVIEDQILGKE* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1235 366 PRINTS Disease resistance protein signature 344 358 - -
Vvi3g1235 366 PRINTS Disease resistance protein signature 174 189 - -
Vvi3g1235 366 PRINTS Disease resistance protein signature 249 263 - -
Vvi3g1235 366 Pfam NB-ARC domain 156 295 IPR002182 GO:0043531
Vvi3g1235 366 PANTHER DISEASE RESISTANCE PROTEIN RP 144 355 IPR044974 GO:0006952
Vvi3g1235 366 Gene3D - 134 311 IPR027417 -
Vvi3g1235 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 358 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1235 Vvi-Chr3 17711834 17712934 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1235 - - vvi:104878927 720.309