Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1233 ATGTTGATGCAGTGTGAGGAAGCAGCAGTGGTGGATGATGGGGTAGAAGTAGAAGAGCTGTTGGAGAATCTTGGGAAAGCTTTGAAGGGTAAAAGGTATTTGATGGTGTTGGACGGCATCTGGGACATCAACATCCACTGGTATTTCAAGTTAAAGGAAAAGTTGAAGTCTGTAAGGGGTGATGGGGACGTCATCATCACCAGCCGTCTCCCCCACAAAGCAAGAATGATGGTGGGCCCTCACAATCTGTATCACATACAGCCTCCAATGAAGGACATGGGGCACATGCGGCAATTCAGAGTAATATTGAGTATGCTTAAAAGGTATAAGTTGAAATTGAAGGATGAGGTTATAGAGCAATGTGATGGCCTCCTATTAGCAATGCACACATTGGCACCAGTGATTGAAGACCAGATCCTGGGAAAAGTCAACCAGATCATCGGAGACAGGAATTTACTTTTTAGTGGAACTGATCAGATGGTGTTGGTCAACCTTGAAGATGATGCTATATTGGGAAATGAGCTTTTGTTATCATGGCGTGGCATCTCAGATATAGAAGAAGGGGTTTGGTTTTAA 576 0.4392 MLMQCEEAAVVDDGVEVEELLENLGKALKGKRYLMVLDGIWDINIHWYFKLKEKLKSVRGDGDVIITSRLPHKARMMVGPHNLYHIQPPMKDMGHMRQFRVILSMLKRYKLKLKDEVIEQCDGLLLAMHTLAPVIEDQILGKVNQIIGDRNLLFSGTDQMVLVNLEDDAILGNELLLSWRGISDIEEGVWF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1233 191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 137 IPR027417 -
Vvi3g1233 191 Gene3D - 2 86 IPR027417 -
Vvi3g1233 191 Pfam NB-ARC domain 13 135 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1233 Vvi-Chr3 17653079 17655497 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1233 - - vvi:104878933 297.36