Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1219 ATGGGCAACGACGCCAACTCTAACGACGAGTCGTCGCTTCTTGAAGAGCTTGGTATCAATAACCAGCAAATCTGGAGCAAGATGGTACTGATTTTCAACCCTTTTCGTGTGAACCCGAATCTTCACAAGGACACTGATTTATCGGGTCCATTTTTGTTGTTGATGAGTTTCGGATTGTTTCAATTGCTCACTGAGAAGATACATTTGGGAATAATCTTGGGTTGGGTTATCGTAGCTGCTTTTGTTCTTATATGTGGTGTTCAACATTTTGGTTGGGAGGAATGGGAATTTGGATCTTTACAGATAACTTAA 312 0.4103 MGNDANSNDESSLLEELGINNQQIWSKMVLIFNPFRVNPNLHKDTDLSGPFLLLMSFGLFQLLTEKIHLGIILGWVIVAAFVLICGVQHFGWEEWEFGSLQIT* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1219 103 PANTHER GOLGI MEMBRANE PROTEIN YIP1 8 88 IPR045231 GO:0006888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1219 Vvi-Chr3 17479759 17480301 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1219 K20363 - vvi:100263307 143.665