Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1216 ATGAGTTACCCTCATCAAAAACAGCCTTCAGTAGCAGGGTATCCTCCACAACCTGCAGCCACTGCATACCCTGCAGGGCCTTATGTGGCTCCTCCGCCAGTCGGTTATCCCATGAAACATGGTCATGACTACCCTCAGAACCCAGCTGCAGTGGAGACCAAGGCCAGGGGTGATGGCTTCTTGAAAGGATGCTGTGCTGCCTTGTGTTGCTGCTGTCTCTTGGACGCTTGTTTCTGA 237 0.5359 MSYPHQKQPSVAGYPPQPAATAYPAGPYVAPPPVGYPMKHGHDYPQNPAAVETKARGDGFLKGCCAALCCCCLLDACF* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1216 78 PANTHER RCG49325, ISOFORM CRA_A 1 78 IPR044850 GO:0005886
Vvi3g1216 78 Pfam Cysteine-rich TM module stress tolerance 31 78 IPR028144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1216 Vvi-Chr3 17461382 17461893 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1216 - - vvi:100254685 101.293