Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1212 ATGAGTCACTCACACCAGGCTCCAGAAGTGTATCCTCCACCACCATCCACAGCATACCCATCATCAGGACCATATGTAGCTCCACCCCCAGCTGGCTACCCCATGAAAGATGCTCCCAACCCCCAAAATCCTCCTCCAGTTGAAACCAAGTCCAGGGGTGAGGGCTTCTGGAAAGGATGTTGTGCTGCCTTGTGTTGCTGCTGTGTCTTGGATGCTTGCTTCTGA 225 0.5333 MSHSHQAPEVYPPPPSTAYPSSGPYVAPPPAGYPMKDAPNPQNPPPVETKSRGEGFWKGCCAALCCCCVLDACF* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1212 74 MobiDBLite consensus disorder prediction 8 46 - -
Vvi3g1212 74 MobiDBLite consensus disorder prediction 1 52 - -
Vvi3g1212 74 Pfam Cysteine-rich TM module stress tolerance 28 74 IPR028144 -
Vvi3g1212 74 PANTHER RCG49325, ISOFORM CRA_A 1 74 IPR044850 GO:0005886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1212 Vvi-Chr3 17433328 17433994 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1212 - - vvi:100244413 113.235