Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1211 ATGAGTTACCCTCATCAAAAACAGCCTTCAGTAGCAGGGTATCCTCCACAACCTGCATCCACTGCATACCCTGCAGGGCCTTATGTGGCTCCTCCGCCAGTCGGTTATCCCATGAAACATGGTCATGACTACCCTCAGAACCCAGCTGCAGGGGAGACCAAGGCCAAGGGTGATGGCTTCTTGAAAGGATGTTGTGCTGCCTTGTGTTGCTGCTGTCTCTTGGACGCTTGTTTCTGA 237 0.5274 MSYPHQKQPSVAGYPPQPASTAYPAGPYVAPPPVGYPMKHGHDYPQNPAAGETKAKGDGFLKGCCAALCCCCLLDACF* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1211 78 Pfam Cysteine-rich TM module stress tolerance 31 78 IPR028144 -
Vvi3g1211 78 PANTHER RCG49325, ISOFORM CRA_A 1 78 IPR044850 GO:0005886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1211 Vvi-Chr3 17428872 17429383 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1211 - - vvi:100266732 127.102