Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi3g1210 | ATGAGTAACTCCTATCAACACCAACCTCCTGTGTATCCACCACCACCTGCCGCAGCATACCCGGGAGGACCTCATGTGGCTCCACCTTCAGCCGATTATCCCATGAAAGATGGTCATGGCTACCCTCAAAATCCTGCTTCAGTAGAATCAAAGGCCAAGGGTGATGGATTCTGGAGAGGATGTTGTGCTGGCATGTGTTGCTGCTGCCTTTTGGATGCTTGCTTCTGA | 228 | 0.5132 | MSNSYQHQPPVYPPPPAAAYPGGPHVAPPSADYPMKDGHGYPQNPASVESKAKGDGFWRGCCAGMCCCCLLDACF* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi3g1210 | 75 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Vvi3g1210 | 75 | PANTHER | RCG49325, ISOFORM CRA_A | 1 | 75 | IPR044850 | GO:0005886 | |
| Vvi3g1210 | 75 | MobiDBLite | consensus disorder prediction | 8 | 23 | - | - | |
| Vvi3g1210 | 75 | Pfam | Cysteine-rich TM module stress tolerance | 8 | 75 | IPR028144 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi3g1210 | Vvi-Chr3 | 17403327 | 17403903 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi3g1210 | - | - | vvi:100854539 | 110.923 |