Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1209 ATGTCTGATGAATGGTTAGCTTTAGGCATCGAGGAGAGTATTCTTGAATCCCCAGCAATGACTACTCTCGAGCTTAGCTACACTATTCTTGATCTTCCGCTGAAGATGTGTTTGCTATGCTTTGCAATTTTTCCAGAAAAAGCCATCATCATGAAGAGGCAACTGATTTACTGGTGGATCGGGGAGGGCTTTGTCAGGAAGACCAAGGAGAAAACTGCAGAGGAAATGGGAGAAGAATACTTCCAAAAGCTGATAGACATGGGCTTGATATATCCAAAATACAAGAAAGCTAAGCAGTACAAGAAAGCTAAGCAGGATAAAAAAGAAAGTCCAGAAAGTCCAGAAAGCCCAGAAAGCCCAGAAAGTCCAGAAAGTCCAGTCGTGGACAGCTGCACAATGCACCCTTGGATTCGGCGTATGGTGATCACAGTCGCTAAAAAGGCCGAGTTCTTTGATCTGGATAGGAGAGGGGCACCAACTGCTGTTTCTTCTCAATCACGCCGCATATGCTTTGCAAAGGATTTGGAGATCAATCAAACGGTAACTCCCCCAAATACAGATGAATCGGAAGATCAGCAGACCTCTTTACCTTGGTTCAATAGAGATCAGAAATATCAGCTGCCCTTTGTAACTTTGTTCAATATAGATCAGAAATATGTGGATATTAAAGAGGAGTGGTTTTCCAAGTTGAATAGGGTTTCAGTTCTTCAACTGGGGAGGTGGCAGCATGCTGCAGATCATCATATCGAAGTGGAAAACCAAGATTTCTTGAAACACTTGGGGGCTTTGACGCACCTCAAGTATCTCAGCCTCCGAGGAATGTCAAGAATAACTGAGCTACCTTCTTCAGTTGTTGATCTTGTTCTCCTCCAAATCCTTGATCTCAGGGCATGTCACAATTTGGAGAGGTTGCCTCCGGATATCTCATCATTGAGGAAGCTCACACACTTGGATCTCTCAGAGTGTTACTTGCTCGAAAGCATGCCCAAGGGTCTTGACAAGTTATTTTCTCTGCAAGTGCTGAAAGGATTTGTGATAGAAACTTCAAGAAGAAGATCTGGCAAGCTGGTGGATCTTTCTCAGTTGAAGAAACTACGGAAGCTAAGCATATATATAGGAAGCCAAGATCTTGCTCAACAAGAAGAGCTTCATAGCTTGAAAGATATTCAAAATCTTCGGGTCCTAACAATAACATGGAAAGAAGTGGCAGAAGTAAAGCCAAAAGGTTCTGCACAGTCCGAGGAAGAAAATGAACGACATGCAGGGAAGTCCTTCTCATTCCCTTCAAAATTAGAGAAACTCGACCTTCGGTGCATCCCTTTTAAAAATCAACCAGAATGGTTGAAGCCTAGCCTCTTATTCAATTTAAAAAGTTTATATATCAGAGGAGGGAAACTCGATGGTTTGGCTACAGAAACAAATCAGAAGTGGAAGGTCAAGATTCTACGTCTGAAATATCTGAACGCCTTCCAGACGGACGATAAAATATTGTTGAAAGATTTTCCTGATCTGAAATATTTTGAGAAAATAAATACCTTGAAAGGGGACGAAGTTTGGGGAAAAGAATCTTATGAAGAAGATGAAAAGAGTGGAGAAAACAAAGCTAATGAGACAAAACAAGATACTCCAATTCAGGGTGAGGAGAAGATGATCGGGGAGATGAAAGCGAGCCATATCCAAGAATCTAGCCAAATTCTGAAACAAGATGATGACAAAGTGTTGAGCAATGCTGTAACTCCAGAAAGCGAAACCAAGCAAGGTTATAATAATCAAGTGCCAAACAAAATTGAGGATGAAAAAGCAAGCTCCAGCAAGGTATCAACAAATGAACCAAAGCCTACATCTACTAGTGTGGGTAAGGAAGAGACCAAAGCAGATACCAAAGTTCAAGAAACCAAGACACTTGTGAAACAAGGAGATAATGATCAAGTTCCCAACAAAGTTGAGGGTGAAAAAGCAAACTCCAGCAAGGCTAAGGAAGAGACCAAAGCAGATACAAAAGTTCAAGAATCCAAGGGACCTATGAAACAAGGAGATAACGATCAAGTGCCAAACAAAGTTGAGGGTGAAAACCCAAGCACCAGCAAGGAATTGACGAATGAACCAAATCTTACATCTACTATTGTGCGCAAGGAAGAGACCAAAGCAGATAGCAAAGTTGAAGAATCCAAGGGACTTGTGAAACAAGGAGATAATGATCAAGTGGTGAACAAAGCTGTGGAGGGAAGCACAAATAAGCTCATATCAGATAAATCTCGTCTTGTTTCTCCTATTATGAATGAATAG 2286 0.4143 MSDEWLALGIEESILESPAMTTLELSYTILDLPLKMCLLCFAIFPEKAIIMKRQLIYWWIGEGFVRKTKEKTAEEMGEEYFQKLIDMGLIYPKYKKAKQYKKAKQDKKESPESPESPESPESPESPVVDSCTMHPWIRRMVITVAKKAEFFDLDRRGAPTAVSSQSRRICFAKDLEINQTVTPPNTDESEDQQTSLPWFNRDQKYQLPFVTLFNIDQKYVDIKEEWFSKLNRVSVLQLGRWQHAADHHIEVENQDFLKHLGALTHLKYLSLRGMSRITELPSSVVDLVLLQILDLRACHNLERLPPDISSLRKLTHLDLSECYLLESMPKGLDKLFSLQVLKGFVIETSRRRSGKLVDLSQLKKLRKLSIYIGSQDLAQQEELHSLKDIQNLRVLTITWKEVAEVKPKGSAQSEEENERHAGKSFSFPSKLEKLDLRCIPFKNQPEWLKPSLLFNLKSLYIRGGKLDGLATETNQKWKVKILRLKYLNAFQTDDKILLKDFPDLKYFEKINTLKGDEVWGKESYEEDEKSGENKANETKQDTPIQGEEKMIGEMKASHIQESSQILKQDDDKVLSNAVTPESETKQGYNNQVPNKIEDEKASSSKVSTNEPKPTSTSVGKEETKADTKVQETKTLVKQGDNDQVPNKVEGEKANSSKAKEETKADTKVQESKGPMKQGDNDQVPNKVEGENPSTSKELTNEPNLTSTIVRKEETKADSKVEESKGLVKQGDNDQVVNKAVEGSTNKLISDKSRLVSPIMNE* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1209 761 MobiDBLite consensus disorder prediction 675 707 - -
Vvi3g1209 761 MobiDBLite consensus disorder prediction 102 129 - -
Vvi3g1209 761 MobiDBLite consensus disorder prediction 708 728 - -
Vvi3g1209 761 Gene3D Ribonuclease Inhibitor 202 514 IPR032675 -
Vvi3g1209 761 PANTHER DISEASE RESISTANCE PROTEIN RP 4 508 IPR044974 GO:0006952
Vvi3g1209 761 MobiDBLite consensus disorder prediction 617 635 - -
Vvi3g1209 761 Gene3D - 21 106 IPR036388 -
Vvi3g1209 761 MobiDBLite consensus disorder prediction 524 544 - -
Vvi3g1209 761 Coils Coil 521 541 - -
Vvi3g1209 761 MobiDBLite consensus disorder prediction 575 597 - -
Vvi3g1209 761 MobiDBLite consensus disorder prediction 644 674 - -
Vvi3g1209 761 SUPERFAMILY L domain-like 205 506 - -
Vvi3g1209 761 MobiDBLite consensus disorder prediction 557 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1209 Vvi-Chr3 17394323 17398142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1209 260 543 Receptor kinase-like Gene Family AT3G05370 25.839 5.80e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1209 - - vvi:100258171 1441.02