Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1203 ATGGCTTCCACCGCCTCCGCTCTCACCACCACCACCTCCTCCTCCAATGTCGCCACCCCTTTTCTGTATCTCCGCCGCACTCATATCTCCCACTTCACCTCTAATTTCAGTCTTCATTCTTTTTCCAGGTCTGGTAGCAGAGTATGCTTCTCAAATAATGCGAAAATATCATCATATCCGTGCCATGATTACCGAAACCGAGTAAAATTCAAACGATTTGAATGTAGAGTAGAGGATTCTTACACTAATAATAAAGAGATATCGAAAGGAACCTTGATATGGAGAGCAATCAAATTGCCAATTTACTCTGTTGCATTGGTTCCCCTCACTGTAGGCAGTGCTGCGGCTTATTTGCAGACAGGCCTATTTTCAGCAAGGCAGTATTTTACTCTCTTGGCTTCCTCAGTTCTTATCATCGCTTGGCTCAATTTAAGCAACGATGTGTACGATTTTGACACAGGAGCAGATAAGAACAAGAAAGAATCTGTTGTAAACATGGTTGGCAGTCGTACAGGGACCCATGCTGCTGCATATGCATTGCTTGCTCTTGGGTTTGTTGGGCTTAGCTGGGCATCCATGGTGGCTGGAAATTTTCGAGCAATACTATTACTGGCTTGTGCAGTTACTTGTGGGTATATATATCAGTGTCCACCATTTCGGTTAAGTTACCAGGGTCTTGGAGAGCCTCTGTGCTTTGCGGCATTCGGTCCTTTCGCCACCACTGCCTTCTACTTGATGCAGACAGCTACAAGTGAGATGATCTCTCCTCTGGTGACTGCCACAGTTCTTTCTGCATCACTTCTTGTTGGTTTCACAACAACCCTAATCCTCTTCTGCAGTCACTTCCATCAGGTGGAAGGAGATAGAGCGGTTGGAAAAATGTCACCTCTCGTTAGGCTCGATACTGAGAAGGGCTCAAGGATTGTAAAAATGGCAATGGCGATGCTCTACTCGCTTCTATTAGCTTTTGGTCTAGCCAAAACTCTTCCCTTCACTTGCATATTCTCTTGTGCTCTAACAATACCCATGGCGAAGCTGGTTGTTAGCTATGTTGAAGACAATCACAAGGACAACTCGAAGATCTTCATGGCAAAGTATTATTGTGTGAGATTACACGCCTTATTTGGAGCTGCATTGGCCGCTGGGCTTGTGGCAGCTAGATTACTCACCAAAAGATAA 1179 0.4504 MASTASALTTTTSSSNVATPFLYLRRTHISHFTSNFSLHSFSRSGSRVCFSNNAKISSYPCHDYRNRVKFKRFECRVEDSYTNNKEISKGTLIWRAIKLPIYSVALVPLTVGSAAAYLQTGLFSARQYFTLLASSVLIIAWLNLSNDVYDFDTGADKNKKESVVNMVGSRTGTHAAAYALLALGFVGLSWASMVAGNFRAILLLACAVTCGYIYQCPPFRLSYQGLGEPLCFAAFGPFATTAFYLMQTATSEMISPLVTATVLSASLLVGFTTTLILFCSHFHQVEGDRAVGKMSPLVRLDTEKGSRIVKMAMAMLYSLLLAFGLAKTLPFTCIFSCALTIPMAKLVVSYVEDNHKDNSKIFMAKYYCVRLHALFGAALAAGLVAARLLTKR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1203 392 CDD PT_UbiA_UBIAD1 94 365 IPR026046 GO:0004659
Vvi3g1203 392 Hamap 2-carboxy-1,4-naphthoquinone phytyltransferase [menA]. 78 383 IPR011937 GO:0004659|GO:0016020|GO:0042372
Vvi3g1203 392 Pfam UbiA prenyltransferase family 106 363 IPR000537 GO:0016020|GO:0016765
Vvi3g1203 392 NCBIfam 2-carboxy-1,4-naphthoquinone phytyltransferase 94 384 IPR011937 GO:0004659|GO:0016020|GO:0042372
Vvi3g1203 392 PANTHER 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE 78 388 IPR026046 GO:0004659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1203 K23094 - vvi:100256517 728.013